Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav6-6A0A075B603 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-6A0A075B603 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-6A0A075B603 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-6A0A075B603 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-6A0A075B603 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-6A0A075B603 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-6A0A075B603 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.81□□□□□ -0.04
Trav6-6A0A075B603 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-6A0A075B603 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-6A0A075B603 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-6A0A075B603 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-6A0A075B603 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav6-6A0A075B603 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-6A0A075B603 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms