Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 PSAT1P2-201ENST00000426107 972 ntBASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 AC048344.4-201ENST00000619744 527 ntBASIC5.57□□□□□ -1.52
KRTAP4-4Q9BYR3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-4Q9BYR3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-4Q9BYR3 MTND2P38-201ENST00000522536 667 ntBASIC5.56□□□□□ -1.52
KRTAP4-4Q9BYR3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-4Q9BYR3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-4Q9BYR3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.55□□□□□ -1.52
KRTAP4-4Q9BYR3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC5.55□□□□□ -1.52
KRTAP4-4Q9BYR3 AL392048.1-201ENST00000613946 534 ntBASIC5.55□□□□□ -1.52
KRTAP4-4Q9BYR3 AP003108.4-201ENST00000623917 878 ntBASIC5.55□□□□□ -1.52
KRTAP4-4Q9BYR3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP4-4Q9BYR3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.54□□□□□ -1.52
KRTAP4-4Q9BYR3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRTAP4-4Q9BYR3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-4Q9BYR3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
KRTAP4-4Q9BYR3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 RN7SKP199-201ENST00000410325 305 ntBASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 AC090079.2-201ENST00000575289 768 ntBASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-4Q9BYR3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 MTND2P40-201ENST00000436718 841 ntBASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 MTND2P25-201ENST00000449028 610 ntBASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 AC108673.3-201ENST00000609183 335 ntBASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 AC008147.4-201ENST00000617570 1204 ntBASIC5.51□□□□□ -1.53
KRTAP4-4Q9BYR3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-4Q9BYR3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-4Q9BYR3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-4Q9BYR3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.5□□□□□ -1.53
KRTAP4-4Q9BYR3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KRTAP4-4Q9BYR3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-4Q9BYR3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-4Q9BYR3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-4Q9BYR3 MFSD8-213ENST00000641134 1327 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 Z97985.1-201ENST00000332270 946 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 ART2BP-201ENST00000453501 499 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AL158211.2-201ENST00000607282 395 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AC013470.4-201ENST00000619978 986 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 AP003400.5-201ENST00000624827 617 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 CFTRP2-201ENST00000634304 199 ntBASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
KRTAP4-4Q9BYR3 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 AC006518.1-201ENST00000541449 943 ntBASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-4Q9BYR3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 AC093801.2-201ENST00000503966 1050 ntBASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 AP005121.2-201ENST00000583306 1101 ntBASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-4Q9BYR3 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 ATG10-IT1-201ENST00000396880 487 ntBASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 ELOCP6-201ENST00000429066 328 ntBASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 ELOCP12-201ENST00000458706 328 ntBASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC020699.1-201ENST00000505161 445 ntBASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AL391597.1-201ENST00000618707 694 ntBASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC015813.7-201ENST00000623294 581 ntBASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.45□□□□□ -1.54
KRTAP4-4Q9BYR3 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms