Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31,75■■■□□ 2,67
Pcdh15Q99PJ1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Pcdh15Q99PJ1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Pcdh15Q99PJ1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Pcdh15Q99PJ1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31,7■■■□□ 2,67
Pcdh15Q99PJ1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31,68■■■□□ 2,66
Pcdh15Q99PJ1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31,65■■■□□ 2,66
Pcdh15Q99PJ1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31,61■■■□□ 2,65
Pcdh15Q99PJ1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
Pcdh15Q99PJ1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
Pcdh15Q99PJ1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31,59■■■□□ 2,65
Pcdh15Q99PJ1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31,57■■■□□ 2,64
Pcdh15Q99PJ1 Gm9397-201ENSMUST00000200125 605 ntBASIC31,55■■■□□ 2,64
Pcdh15Q99PJ1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Pcdh15Q99PJ1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31,49■■■□□ 2,63
Pcdh15Q99PJ1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31,49■■■□□ 2,63
Pcdh15Q99PJ1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31,49■■■□□ 2,63
Pcdh15Q99PJ1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Pcdh15Q99PJ1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31,45■■■□□ 2,63
Pcdh15Q99PJ1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31,45■■■□□ 2,62
Pcdh15Q99PJ1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31,43■■■□□ 2,62
Pcdh15Q99PJ1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
Pcdh15Q99PJ1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31,42■■■□□ 2,62
Pcdh15Q99PJ1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Pcdh15Q99PJ1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31,39■■■□□ 2,62
Pcdh15Q99PJ1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31,38■■■□□ 2,61
Pcdh15Q99PJ1 Gm5987-201ENSMUST00000196433 1151 ntBASIC31,38■■■□□ 2,61
Pcdh15Q99PJ1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Pcdh15Q99PJ1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31,37■■■□□ 2,61
Pcdh15Q99PJ1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31,37■■■□□ 2,61
Pcdh15Q99PJ1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31,36■■■□□ 2,61
Pcdh15Q99PJ1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31,36■■■□□ 2,61
Pcdh15Q99PJ1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31,36■■■□□ 2,61
Pcdh15Q99PJ1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31,35■■■□□ 2,61
Pcdh15Q99PJ1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Pcdh15Q99PJ1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31,35■■■□□ 2,61
Pcdh15Q99PJ1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31,32■■■□□ 2,6
Pcdh15Q99PJ1 Mipep-204ENSMUST00000225043 1548 ntBASIC31,32■■■□□ 2,6
Pcdh15Q99PJ1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31,31■■■□□ 2,6
Pcdh15Q99PJ1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Pcdh15Q99PJ1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Pcdh15Q99PJ1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31,28■■■□□ 2,6
Pcdh15Q99PJ1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31,26■■■□□ 2,6
Pcdh15Q99PJ1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31,26■■■□□ 2,6
Pcdh15Q99PJ1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31,25■■■□□ 2,59
Pcdh15Q99PJ1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Pcdh15Q99PJ1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31,23■■■□□ 2,59
Pcdh15Q99PJ1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31,23■■■□□ 2,59
Pcdh15Q99PJ1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31,22■■■□□ 2,59
Pcdh15Q99PJ1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31,22■■■□□ 2,59
Pcdh15Q99PJ1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,59
Pcdh15Q99PJ1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31,18■■■□□ 2,58
Pcdh15Q99PJ1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31,18■■■□□ 2,58
Pcdh15Q99PJ1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31,18■■■□□ 2,58
Pcdh15Q99PJ1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31,16■■■□□ 2,58
Pcdh15Q99PJ1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31,16■■■□□ 2,58
Pcdh15Q99PJ1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31,16■■■□□ 2,58
Pcdh15Q99PJ1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31,14■■■□□ 2,57
Pcdh15Q99PJ1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31,12■■■□□ 2,57
Pcdh15Q99PJ1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31,08■■■□□ 2,57
Pcdh15Q99PJ1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Pcdh15Q99PJ1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31,02■■■□□ 2,56
Pcdh15Q99PJ1 Gm24970-201ENSMUST00000175582 82 ntBASIC31,01■■■□□ 2,55
Pcdh15Q99PJ1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31■■■□□ 2,55
Pcdh15Q99PJ1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30,94■■■□□ 2,54
Pcdh15Q99PJ1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30,92■■■□□ 2,54
Pcdh15Q99PJ1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30,92■■■□□ 2,54
Pcdh15Q99PJ1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30,91■■■□□ 2,54
Pcdh15Q99PJ1 Gm8503-201ENSMUST00000118131 455 ntBASIC30,88■■■□□ 2,53
Pcdh15Q99PJ1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30,88■■■□□ 2,53
Pcdh15Q99PJ1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30,88■■■□□ 2,53
Pcdh15Q99PJ1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,87■■■□□ 2,53
Pcdh15Q99PJ1 Gm9939-201ENSMUST00000067161 1154 ntBASIC30,86■■■□□ 2,53
Pcdh15Q99PJ1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Pcdh15Q99PJ1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Pcdh15Q99PJ1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Pcdh15Q99PJ1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Pcdh15Q99PJ1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30,76■■■□□ 2,51
Pcdh15Q99PJ1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Pcdh15Q99PJ1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Pcdh15Q99PJ1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30,73■■■□□ 2,51
Pcdh15Q99PJ1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30,71■■■□□ 2,51
Pcdh15Q99PJ1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Pcdh15Q99PJ1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30,68■■■□□ 2,5
Pcdh15Q99PJ1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Pcdh15Q99PJ1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30,65■■■□□ 2,5
Pcdh15Q99PJ1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30,62■■■□□ 2,49
Pcdh15Q99PJ1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30,59■■■□□ 2,49
Pcdh15Q99PJ1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30,59■■■□□ 2,49
Pcdh15Q99PJ1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30,59■■■□□ 2,49
Pcdh15Q99PJ1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30,59■■■□□ 2,49
Pcdh15Q99PJ1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Pcdh15Q99PJ1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30,56■■■□□ 2,48
Pcdh15Q99PJ1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Pcdh15Q99PJ1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30,54■■■□□ 2,48
Pcdh15Q99PJ1 Gm6821-201ENSMUST00000107540 542 ntBASIC30,54■■■□□ 2,48
Pcdh15Q99PJ1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Pcdh15Q99PJ1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30,53■■■□□ 2,48
Pcdh15Q99PJ1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Pcdh15Q99PJ1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30,49■■■□□ 2,47
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms