Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31,02■■■□□ 2,56
Rfc4Q99J62 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31,02■■■□□ 2,56
Rfc4Q99J62 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Rfc4Q99J62 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31■■■□□ 2,55
Rfc4Q99J62 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31■■■□□ 2,55
Rfc4Q99J62 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30,99■■■□□ 2,55
Rfc4Q99J62 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Rfc4Q99J62 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30,93■■■□□ 2,54
Rfc4Q99J62 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Rfc4Q99J62 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30,91■■■□□ 2,54
Rfc4Q99J62 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Rfc4Q99J62 Mipep-204ENSMUST00000225043 1548 ntBASIC30,88■■■□□ 2,53
Rfc4Q99J62 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30,82■■■□□ 2,52
Rfc4Q99J62 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30,8■■■□□ 2,52
Rfc4Q99J62 Gm45855-201ENSMUST00000212546 880 ntBASIC30,8■■■□□ 2,52
Rfc4Q99J62 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Rfc4Q99J62 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30,78■■■□□ 2,52
Rfc4Q99J62 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30,76■■■□□ 2,51
Rfc4Q99J62 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30,75■■■□□ 2,51
Rfc4Q99J62 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30,75■■■□□ 2,51
Rfc4Q99J62 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Rfc4Q99J62 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30,73■■■□□ 2,51
Rfc4Q99J62 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30,73■■■□□ 2,51
Rfc4Q99J62 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30,72■■■□□ 2,51
Rfc4Q99J62 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30,71■■■□□ 2,51
Rfc4Q99J62 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30,71■■■□□ 2,51
Rfc4Q99J62 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30,7■■■□□ 2,51
Rfc4Q99J62 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30,7■■■□□ 2,51
Rfc4Q99J62 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30,66■■■□□ 2,5
Rfc4Q99J62 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30,66■■■□□ 2,5
Rfc4Q99J62 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30,66■■■□□ 2,5
Rfc4Q99J62 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Rfc4Q99J62 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30,62■■■□□ 2,49
Rfc4Q99J62 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Rfc4Q99J62 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Rfc4Q99J62 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30,54■■■□□ 2,48
Rfc4Q99J62 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Rfc4Q99J62 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,52■■■□□ 2,48
Rfc4Q99J62 Gm9397-201ENSMUST00000200125 605 ntBASIC30,52■■■□□ 2,48
Rfc4Q99J62 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Rfc4Q99J62 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30,5■■■□□ 2,47
Rfc4Q99J62 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Rfc4Q99J62 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Rfc4Q99J62 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Rfc4Q99J62 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Rfc4Q99J62 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Rfc4Q99J62 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30,44■■■□□ 2,46
Rfc4Q99J62 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Rfc4Q99J62 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Rfc4Q99J62 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Rfc4Q99J62 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30,41■■■□□ 2,46
Rfc4Q99J62 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Rfc4Q99J62 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Rfc4Q99J62 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30,39■■■□□ 2,46
Rfc4Q99J62 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30,39■■■□□ 2,46
Rfc4Q99J62 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30,38■■■□□ 2,45
Rfc4Q99J62 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30,38■■■□□ 2,45
Rfc4Q99J62 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30,37■■■□□ 2,45
Rfc4Q99J62 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30,37■■■□□ 2,45
Rfc4Q99J62 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Rfc4Q99J62 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Rfc4Q99J62 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30,35■■■□□ 2,45
Rfc4Q99J62 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30,3■■■□□ 2,44
Rfc4Q99J62 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Rfc4Q99J62 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30,29■■■□□ 2,44
Rfc4Q99J62 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Rfc4Q99J62 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Rfc4Q99J62 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Rfc4Q99J62 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30,24■■■□□ 2,43
Rfc4Q99J62 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30,21■■■□□ 2,43
Rfc4Q99J62 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Rfc4Q99J62 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30,2■■■□□ 2,43
Rfc4Q99J62 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30,2■■■□□ 2,42
Rfc4Q99J62 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30,19■■■□□ 2,42
Rfc4Q99J62 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Rfc4Q99J62 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Rfc4Q99J62 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
Rfc4Q99J62 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30,15■■■□□ 2,42
Rfc4Q99J62 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,14■■■□□ 2,42
Rfc4Q99J62 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Rfc4Q99J62 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Rfc4Q99J62 Gm24970-201ENSMUST00000175582 82 ntBASIC30,12■■■□□ 2,41
Rfc4Q99J62 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30,12■■■□□ 2,41
Rfc4Q99J62 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,12■■■□□ 2,41
Rfc4Q99J62 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Rfc4Q99J62 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30,11■■■□□ 2,41
Rfc4Q99J62 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30,1■■■□□ 2,41
Rfc4Q99J62 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
Rfc4Q99J62 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30,09■■■□□ 2,41
Rfc4Q99J62 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30,09■■■□□ 2,41
Rfc4Q99J62 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
Rfc4Q99J62 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30,07■■■□□ 2,4
Rfc4Q99J62 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Rfc4Q99J62 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30,03■■■□□ 2,4
Rfc4Q99J62 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30,02■■■□□ 2,4
Rfc4Q99J62 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Rfc4Q99J62 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Rfc4Q99J62 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Rfc4Q99J62 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Rfc4Q99J62 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Retrieved 100 of 76,532 protein–RNA pairs in 20,9 ms