Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Abca3Q8R420 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Abca3Q8R420 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
Abca3Q8R420 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Abca3Q8R420 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Abca3Q8R420 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Abca3Q8R420 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC34.48■■■■□ 3.11
Abca3Q8R420 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Abca3Q8R420 Gm45855-201ENSMUST00000212546 880 ntBASIC34.45■■■■□ 3.11
Abca3Q8R420 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Abca3Q8R420 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Abca3Q8R420 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34.4■■■■□ 3.1
Abca3Q8R420 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Abca3Q8R420 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Abca3Q8R420 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Abca3Q8R420 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Abca3Q8R420 Gm9397-201ENSMUST00000200125 605 ntBASIC34.33■■■■□ 3.09
Abca3Q8R420 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Abca3Q8R420 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Abca3Q8R420 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC34.29■■■■□ 3.08
Abca3Q8R420 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
Abca3Q8R420 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.08
Abca3Q8R420 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.26■■■■□ 3.07
Abca3Q8R420 Mipep-204ENSMUST00000225043 1548 ntBASIC34.25■■■■□ 3.07
Abca3Q8R420 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Abca3Q8R420 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC34.23■■■■□ 3.07
Abca3Q8R420 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC34.2■■■■□ 3.07
Abca3Q8R420 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Abca3Q8R420 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Abca3Q8R420 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC34.16■■■■□ 3.06
Abca3Q8R420 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Abca3Q8R420 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Abca3Q8R420 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Abca3Q8R420 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Abca3Q8R420 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Abca3Q8R420 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Abca3Q8R420 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Abca3Q8R420 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC34.11■■■■□ 3.05
Abca3Q8R420 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
Abca3Q8R420 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Abca3Q8R420 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC34.08■■■■□ 3.05
Abca3Q8R420 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Abca3Q8R420 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Abca3Q8R420 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC34.03■■■■□ 3.04
Abca3Q8R420 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Abca3Q8R420 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Abca3Q8R420 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Abca3Q8R420 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC33.98■■■■□ 3.03
Abca3Q8R420 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.98■■■■□ 3.03
Abca3Q8R420 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC33.97■■■■□ 3.03
Abca3Q8R420 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
Abca3Q8R420 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Abca3Q8R420 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC33.96■■■■□ 3.03
Abca3Q8R420 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Abca3Q8R420 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Abca3Q8R420 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Abca3Q8R420 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Abca3Q8R420 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC33.84■■■■□ 3.01
Abca3Q8R420 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.84■■■■□ 3.01
Abca3Q8R420 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.82■■■■□ 3
Abca3Q8R420 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.79■■■■□ 3
Abca3Q8R420 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.78■■■■□ 3
Abca3Q8R420 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC33.78■■■■□ 3
Abca3Q8R420 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.78■■■■□ 3
Abca3Q8R420 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC33.77■■■■□ 3
Abca3Q8R420 Gm24970-201ENSMUST00000175582 82 ntBASIC33.77■■■■□ 3
Abca3Q8R420 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC33.76■■■■□ 3
Abca3Q8R420 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.76■■■□□ 2.99
Abca3Q8R420 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33.75■■■□□ 2.99
Abca3Q8R420 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC33.74■■■□□ 2.99
Abca3Q8R420 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Abca3Q8R420 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Abca3Q8R420 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Abca3Q8R420 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC33.65■■■□□ 2.98
Abca3Q8R420 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Abca3Q8R420 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Abca3Q8R420 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC33.53■■■□□ 2.96
Abca3Q8R420 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Abca3Q8R420 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Abca3Q8R420 Gm8503-201ENSMUST00000118131 455 ntBASIC33.53■■■□□ 2.96
Abca3Q8R420 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.95
Abca3Q8R420 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC33.51■■■□□ 2.95
Abca3Q8R420 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.5■■■□□ 2.95
Abca3Q8R420 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Abca3Q8R420 Gm9939-201ENSMUST00000067161 1154 ntBASIC33.46■■■□□ 2.95
Abca3Q8R420 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Abca3Q8R420 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC33.43■■■□□ 2.94
Abca3Q8R420 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Abca3Q8R420 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Abca3Q8R420 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC33.42■■■□□ 2.94
Abca3Q8R420 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC33.42■■■□□ 2.94
Abca3Q8R420 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Abca3Q8R420 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Abca3Q8R420 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Abca3Q8R420 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC33.4■■■□□ 2.94
Abca3Q8R420 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Abca3Q8R420 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Abca3Q8R420 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
Abca3Q8R420 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Abca3Q8R420 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms