Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.84■■■□□ 2.69
Shtn1Q8K2Q9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Shtn1Q8K2Q9 Gm45855-201ENSMUST00000212546 880 ntBASIC31.81■■■□□ 2.68
Shtn1Q8K2Q9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Shtn1Q8K2Q9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.73■■■□□ 2.67
Shtn1Q8K2Q9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Shtn1Q8K2Q9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Shtn1Q8K2Q9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.71■■■□□ 2.67
Shtn1Q8K2Q9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Shtn1Q8K2Q9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Shtn1Q8K2Q9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Shtn1Q8K2Q9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shtn1Q8K2Q9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
Shtn1Q8K2Q9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.62■■■□□ 2.65
Shtn1Q8K2Q9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Shtn1Q8K2Q9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Shtn1Q8K2Q9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
Shtn1Q8K2Q9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shtn1Q8K2Q9 Mipep-204ENSMUST00000225043 1548 ntBASIC31.59■■■□□ 2.65
Shtn1Q8K2Q9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shtn1Q8K2Q9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Shtn1Q8K2Q9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Shtn1Q8K2Q9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shtn1Q8K2Q9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Shtn1Q8K2Q9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Shtn1Q8K2Q9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.49■■■□□ 2.63
Shtn1Q8K2Q9 Gm9397-201ENSMUST00000200125 605 ntBASIC31.48■■■□□ 2.63
Shtn1Q8K2Q9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Shtn1Q8K2Q9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Shtn1Q8K2Q9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.46■■■□□ 2.63
Shtn1Q8K2Q9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Shtn1Q8K2Q9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.44■■■□□ 2.62
Shtn1Q8K2Q9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.43■■■□□ 2.62
Shtn1Q8K2Q9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Shtn1Q8K2Q9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
Shtn1Q8K2Q9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Shtn1Q8K2Q9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Shtn1Q8K2Q9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Shtn1Q8K2Q9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Shtn1Q8K2Q9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
Shtn1Q8K2Q9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shtn1Q8K2Q9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shtn1Q8K2Q9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Shtn1Q8K2Q9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.28■■■□□ 2.6
Shtn1Q8K2Q9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.28■■■□□ 2.6
Shtn1Q8K2Q9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Shtn1Q8K2Q9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shtn1Q8K2Q9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Shtn1Q8K2Q9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Shtn1Q8K2Q9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Shtn1Q8K2Q9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Shtn1Q8K2Q9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shtn1Q8K2Q9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Shtn1Q8K2Q9 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.23■■■□□ 2.59
Shtn1Q8K2Q9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.23■■■□□ 2.59
Shtn1Q8K2Q9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Shtn1Q8K2Q9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Shtn1Q8K2Q9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Shtn1Q8K2Q9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.19■■■□□ 2.58
Shtn1Q8K2Q9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Shtn1Q8K2Q9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.17■■■□□ 2.58
Shtn1Q8K2Q9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Shtn1Q8K2Q9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Shtn1Q8K2Q9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.13■■■□□ 2.57
Shtn1Q8K2Q9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.13■■■□□ 2.57
Shtn1Q8K2Q9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Shtn1Q8K2Q9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Shtn1Q8K2Q9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Shtn1Q8K2Q9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.05■■■□□ 2.56
Shtn1Q8K2Q9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Shtn1Q8K2Q9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Shtn1Q8K2Q9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.03■■■□□ 2.56
Shtn1Q8K2Q9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Shtn1Q8K2Q9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.01■■■□□ 2.55
Shtn1Q8K2Q9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Shtn1Q8K2Q9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.96■■■□□ 2.55
Shtn1Q8K2Q9 Gm24970-201ENSMUST00000175582 82 ntBASIC30.94■■■□□ 2.54
Shtn1Q8K2Q9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Shtn1Q8K2Q9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Shtn1Q8K2Q9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Shtn1Q8K2Q9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.89■■■□□ 2.54
Shtn1Q8K2Q9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Shtn1Q8K2Q9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
Shtn1Q8K2Q9 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.85■■■□□ 2.53
Shtn1Q8K2Q9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
Shtn1Q8K2Q9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Shtn1Q8K2Q9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.81■■■□□ 2.52
Shtn1Q8K2Q9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Shtn1Q8K2Q9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Shtn1Q8K2Q9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Shtn1Q8K2Q9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.77■■■□□ 2.52
Shtn1Q8K2Q9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.76■■■□□ 2.51
Shtn1Q8K2Q9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.76■■■□□ 2.51
Shtn1Q8K2Q9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Shtn1Q8K2Q9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.75■■■□□ 2.51
Shtn1Q8K2Q9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shtn1Q8K2Q9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shtn1Q8K2Q9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shtn1Q8K2Q9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shtn1Q8K2Q9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms