Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Smc4Q8CG47 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Smc4Q8CG47 Gm16148-201ENSMUST00000119653 893 ntBASIC32.75■■■□□ 2.83
Smc4Q8CG47 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Smc4Q8CG47 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.74■■■□□ 2.83
Smc4Q8CG47 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
Smc4Q8CG47 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Smc4Q8CG47 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
Smc4Q8CG47 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Smc4Q8CG47 Zfp131-205ENSMUST00000223812 663 ntBASIC32.68■■■□□ 2.82
Smc4Q8CG47 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Smc4Q8CG47 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Smc4Q8CG47 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Smc4Q8CG47 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Smc4Q8CG47 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Smc4Q8CG47 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Smc4Q8CG47 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Smc4Q8CG47 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Smc4Q8CG47 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Smc4Q8CG47 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Smc4Q8CG47 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.54■■■□□ 2.8
Smc4Q8CG47 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Smc4Q8CG47 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Smc4Q8CG47 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Smc4Q8CG47 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Smc4Q8CG47 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Smc4Q8CG47 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.42■■■□□ 2.78
Smc4Q8CG47 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Smc4Q8CG47 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Smc4Q8CG47 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.39■■■□□ 2.78
Smc4Q8CG47 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Smc4Q8CG47 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
Smc4Q8CG47 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Smc4Q8CG47 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
Smc4Q8CG47 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Smc4Q8CG47 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.35■■■□□ 2.77
Smc4Q8CG47 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Smc4Q8CG47 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.33■■■□□ 2.77
Smc4Q8CG47 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Smc4Q8CG47 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Smc4Q8CG47 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Smc4Q8CG47 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Smc4Q8CG47 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Smc4Q8CG47 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Smc4Q8CG47 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.26■■■□□ 2.75
Smc4Q8CG47 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
Smc4Q8CG47 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Smc4Q8CG47 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.19■■■□□ 2.74
Smc4Q8CG47 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Smc4Q8CG47 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Smc4Q8CG47 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Smc4Q8CG47 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Smc4Q8CG47 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.14■■■□□ 2.74
Smc4Q8CG47 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Smc4Q8CG47 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
Smc4Q8CG47 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.13■■■□□ 2.73
Smc4Q8CG47 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Smc4Q8CG47 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Smc4Q8CG47 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Smc4Q8CG47 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Smc4Q8CG47 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Smc4Q8CG47 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Smc4Q8CG47 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Smc4Q8CG47 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Smc4Q8CG47 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Smc4Q8CG47 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
Smc4Q8CG47 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Smc4Q8CG47 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Smc4Q8CG47 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.02■■■□□ 2.72
Smc4Q8CG47 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Smc4Q8CG47 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Smc4Q8CG47 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.96■■■□□ 2.71
Smc4Q8CG47 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Smc4Q8CG47 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Smc4Q8CG47 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.94■■■□□ 2.7
Smc4Q8CG47 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Smc4Q8CG47 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Smc4Q8CG47 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Smc4Q8CG47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Smc4Q8CG47 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.89■■■□□ 2.7
Smc4Q8CG47 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Smc4Q8CG47 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Smc4Q8CG47 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Smc4Q8CG47 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.86■■■□□ 2.69
Smc4Q8CG47 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Smc4Q8CG47 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Smc4Q8CG47 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.84■■■□□ 2.69
Smc4Q8CG47 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Smc4Q8CG47 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Smc4Q8CG47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Smc4Q8CG47 Gm45855-201ENSMUST00000212546 880 ntBASIC31.81■■■□□ 2.68
Smc4Q8CG47 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Smc4Q8CG47 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Smc4Q8CG47 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.74■■■□□ 2.67
Smc4Q8CG47 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.73■■■□□ 2.67
Smc4Q8CG47 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Smc4Q8CG47 Gm9397-201ENSMUST00000200125 605 ntBASIC31.73■■■□□ 2.67
Smc4Q8CG47 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Smc4Q8CG47 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Smc4Q8CG47 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms