Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Ptcd1Q8C2E4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
Ptcd1Q8C2E4 Gm45855-201ENSMUST00000212546 880 ntBASIC33■■■□□ 2.87
Ptcd1Q8C2E4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Ptcd1Q8C2E4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ptcd1Q8C2E4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
Ptcd1Q8C2E4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ptcd1Q8C2E4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ptcd1Q8C2E4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ptcd1Q8C2E4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ptcd1Q8C2E4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.86■■■□□ 2.85
Ptcd1Q8C2E4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ptcd1Q8C2E4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ptcd1Q8C2E4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ptcd1Q8C2E4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ptcd1Q8C2E4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.78■■■□□ 2.84
Ptcd1Q8C2E4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ptcd1Q8C2E4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ptcd1Q8C2E4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ptcd1Q8C2E4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Ptcd1Q8C2E4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ptcd1Q8C2E4 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.68■■■□□ 2.82
Ptcd1Q8C2E4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ptcd1Q8C2E4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ptcd1Q8C2E4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ptcd1Q8C2E4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ptcd1Q8C2E4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
Ptcd1Q8C2E4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Ptcd1Q8C2E4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Ptcd1Q8C2E4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Ptcd1Q8C2E4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ptcd1Q8C2E4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.59■■■□□ 2.81
Ptcd1Q8C2E4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ptcd1Q8C2E4 Gm9397-201ENSMUST00000200125 605 ntBASIC32.57■■■□□ 2.8
Ptcd1Q8C2E4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ptcd1Q8C2E4 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.55■■■□□ 2.8
Ptcd1Q8C2E4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ptcd1Q8C2E4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptcd1Q8C2E4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptcd1Q8C2E4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.53■■■□□ 2.8
Ptcd1Q8C2E4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
Ptcd1Q8C2E4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ptcd1Q8C2E4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ptcd1Q8C2E4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ptcd1Q8C2E4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
Ptcd1Q8C2E4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
Ptcd1Q8C2E4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ptcd1Q8C2E4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.47■■■□□ 2.79
Ptcd1Q8C2E4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.47■■■□□ 2.79
Ptcd1Q8C2E4 Mipep-204ENSMUST00000225043 1548 ntBASIC32.45■■■□□ 2.78
Ptcd1Q8C2E4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.44■■■□□ 2.78
Ptcd1Q8C2E4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ptcd1Q8C2E4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ptcd1Q8C2E4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.42■■■□□ 2.78
Ptcd1Q8C2E4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ptcd1Q8C2E4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.4■■■□□ 2.78
Ptcd1Q8C2E4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.39■■■□□ 2.78
Ptcd1Q8C2E4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ptcd1Q8C2E4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptcd1Q8C2E4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptcd1Q8C2E4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ptcd1Q8C2E4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Ptcd1Q8C2E4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ptcd1Q8C2E4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ptcd1Q8C2E4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ptcd1Q8C2E4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ptcd1Q8C2E4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.29■■■□□ 2.76
Ptcd1Q8C2E4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Ptcd1Q8C2E4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.28■■■□□ 2.76
Ptcd1Q8C2E4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ptcd1Q8C2E4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ptcd1Q8C2E4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.25■■■□□ 2.75
Ptcd1Q8C2E4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Ptcd1Q8C2E4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.24■■■□□ 2.75
Ptcd1Q8C2E4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ptcd1Q8C2E4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ptcd1Q8C2E4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ptcd1Q8C2E4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ptcd1Q8C2E4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.18■■■□□ 2.74
Ptcd1Q8C2E4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.14■■■□□ 2.74
Ptcd1Q8C2E4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ptcd1Q8C2E4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Ptcd1Q8C2E4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.12■■■□□ 2.73
Ptcd1Q8C2E4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ptcd1Q8C2E4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
Ptcd1Q8C2E4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ptcd1Q8C2E4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
Ptcd1Q8C2E4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ptcd1Q8C2E4 Gm24970-201ENSMUST00000175582 82 ntBASIC32.05■■■□□ 2.72
Ptcd1Q8C2E4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.04■■■□□ 2.72
Ptcd1Q8C2E4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ptcd1Q8C2E4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ptcd1Q8C2E4 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.98■■■□□ 2.71
Ptcd1Q8C2E4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ptcd1Q8C2E4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.9■■■□□ 2.7
Ptcd1Q8C2E4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms