Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Limd2Q8BGB5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd2Q8BGB5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd2Q8BGB5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd2Q8BGB5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limd2Q8BGB5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Limd2Q8BGB5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limd2Q8BGB5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Limd2Q8BGB5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd2Q8BGB5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd2Q8BGB5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Limd2Q8BGB5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Limd2Q8BGB5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Limd2Q8BGB5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Limd2Q8BGB5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limd2Q8BGB5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Limd2Q8BGB5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limd2Q8BGB5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Limd2Q8BGB5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limd2Q8BGB5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limd2Q8BGB5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limd2Q8BGB5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Limd2Q8BGB5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limd2Q8BGB5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limd2Q8BGB5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Limd2Q8BGB5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC14.21□□□□□ -0.13
Limd2Q8BGB5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Limd2Q8BGB5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Limd2Q8BGB5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Limd2Q8BGB5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Limd2Q8BGB5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC14.2□□□□□ -0.14
Limd2Q8BGB5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Limd2Q8BGB5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Limd2Q8BGB5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Limd2Q8BGB5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC14.17□□□□□ -0.14
Limd2Q8BGB5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Limd2Q8BGB5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Limd2Q8BGB5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Limd2Q8BGB5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Limd2Q8BGB5 Gm2415-204ENSMUST00000190235 2004 ntBASIC14.15□□□□□ -0.14
Limd2Q8BGB5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC14.15□□□□□ -0.14
Limd2Q8BGB5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Limd2Q8BGB5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Limd2Q8BGB5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Limd2Q8BGB5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Limd2Q8BGB5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limd2Q8BGB5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Limd2Q8BGB5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limd2Q8BGB5 Gm6206-201ENSMUST00000133472 2199 ntBASIC14.09□□□□□ -0.15
Limd2Q8BGB5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Limd2Q8BGB5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limd2Q8BGB5 Gm15045-201ENSMUST00000117359 883 ntBASIC14.07□□□□□ -0.16
Limd2Q8BGB5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Limd2Q8BGB5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Limd2Q8BGB5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limd2Q8BGB5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Limd2Q8BGB5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Limd2Q8BGB5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Limd2Q8BGB5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Limd2Q8BGB5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Limd2Q8BGB5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Limd2Q8BGB5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limd2Q8BGB5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limd2Q8BGB5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limd2Q8BGB5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limd2Q8BGB5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC14.02□□□□□ -0.16
Limd2Q8BGB5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limd2Q8BGB5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Limd2Q8BGB5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Limd2Q8BGB5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Limd2Q8BGB5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limd2Q8BGB5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limd2Q8BGB5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limd2Q8BGB5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Limd2Q8BGB5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Limd2Q8BGB5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Limd2Q8BGB5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Limd2Q8BGB5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Limd2Q8BGB5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Limd2Q8BGB5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Limd2Q8BGB5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limd2Q8BGB5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Limd2Q8BGB5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Limd2Q8BGB5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Limd2Q8BGB5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limd2Q8BGB5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Limd2Q8BGB5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Limd2Q8BGB5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Limd2Q8BGB5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Limd2Q8BGB5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Limd2Q8BGB5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC13.94□□□□□ -0.18
Limd2Q8BGB5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limd2Q8BGB5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms