Protein–RNA interactions for Protein: Q80ZM7

Gtf2a2, Transcription initiation factor IIA subunit 2, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a2Q80ZM7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Gtf2a2Q80ZM7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Gtf2a2Q80ZM7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Gtf2a2Q80ZM7 Gm45855-201ENSMUST00000212546 880 ntBASIC28.86■■■□□ 2.21
Gtf2a2Q80ZM7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Gtf2a2Q80ZM7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Gtf2a2Q80ZM7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Gtf2a2Q80ZM7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Gtf2a2Q80ZM7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.8■■■□□ 2.2
Gtf2a2Q80ZM7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Gtf2a2Q80ZM7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Gtf2a2Q80ZM7 Mipep-204ENSMUST00000225043 1548 ntBASIC28.79■■■□□ 2.2
Gtf2a2Q80ZM7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Gtf2a2Q80ZM7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Gtf2a2Q80ZM7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Gtf2a2Q80ZM7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.71■■■□□ 2.19
Gtf2a2Q80ZM7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.71■■■□□ 2.19
Gtf2a2Q80ZM7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
Gtf2a2Q80ZM7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Gtf2a2Q80ZM7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Gtf2a2Q80ZM7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Gtf2a2Q80ZM7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Gtf2a2Q80ZM7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Gtf2a2Q80ZM7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.66■■■□□ 2.18
Gtf2a2Q80ZM7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Gtf2a2Q80ZM7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Gtf2a2Q80ZM7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Gtf2a2Q80ZM7 Gm9397-201ENSMUST00000200125 605 ntBASIC28.58■■■□□ 2.17
Gtf2a2Q80ZM7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Gtf2a2Q80ZM7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Gtf2a2Q80ZM7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Gtf2a2Q80ZM7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Gtf2a2Q80ZM7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Gtf2a2Q80ZM7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Gtf2a2Q80ZM7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Gtf2a2Q80ZM7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Gtf2a2Q80ZM7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Gtf2a2Q80ZM7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
Gtf2a2Q80ZM7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.49■■■□□ 2.15
Gtf2a2Q80ZM7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gtf2a2Q80ZM7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gtf2a2Q80ZM7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Gtf2a2Q80ZM7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Gtf2a2Q80ZM7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Gtf2a2Q80ZM7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Gtf2a2Q80ZM7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Gtf2a2Q80ZM7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.44■■■□□ 2.14
Gtf2a2Q80ZM7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.44■■■□□ 2.14
Gtf2a2Q80ZM7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
Gtf2a2Q80ZM7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Gtf2a2Q80ZM7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.42■■■□□ 2.14
Gtf2a2Q80ZM7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.35■■■□□ 2.13
Gtf2a2Q80ZM7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Gtf2a2Q80ZM7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Gtf2a2Q80ZM7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Gtf2a2Q80ZM7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.33■■■□□ 2.13
Gtf2a2Q80ZM7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.32■■■□□ 2.12
Gtf2a2Q80ZM7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Gtf2a2Q80ZM7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Gtf2a2Q80ZM7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Gtf2a2Q80ZM7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Gtf2a2Q80ZM7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.25■■■□□ 2.11
Gtf2a2Q80ZM7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Gtf2a2Q80ZM7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.25■■■□□ 2.11
Gtf2a2Q80ZM7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.24■■■□□ 2.11
Gtf2a2Q80ZM7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Gtf2a2Q80ZM7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.21■■■□□ 2.11
Gtf2a2Q80ZM7 Gm24970-201ENSMUST00000175582 82 ntBASIC28.21■■■□□ 2.11
Gtf2a2Q80ZM7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.21■■■□□ 2.11
Gtf2a2Q80ZM7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Gtf2a2Q80ZM7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Gtf2a2Q80ZM7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Gtf2a2Q80ZM7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Gtf2a2Q80ZM7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Gtf2a2Q80ZM7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Gtf2a2Q80ZM7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Gtf2a2Q80ZM7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.16■■■□□ 2.1
Gtf2a2Q80ZM7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Gtf2a2Q80ZM7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Gtf2a2Q80ZM7 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.13■■■□□ 2.09
Gtf2a2Q80ZM7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gtf2a2Q80ZM7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Gtf2a2Q80ZM7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Gtf2a2Q80ZM7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Gtf2a2Q80ZM7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.07■■■□□ 2.08
Gtf2a2Q80ZM7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
Gtf2a2Q80ZM7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Gtf2a2Q80ZM7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.04■■■□□ 2.08
Gtf2a2Q80ZM7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Gtf2a2Q80ZM7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Gtf2a2Q80ZM7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Gtf2a2Q80ZM7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.97■■■□□ 2.07
Gtf2a2Q80ZM7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Gtf2a2Q80ZM7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Gtf2a2Q80ZM7 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.94■■■□□ 2.06
Gtf2a2Q80ZM7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Gtf2a2Q80ZM7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Gtf2a2Q80ZM7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.92■■■□□ 2.06
Gtf2a2Q80ZM7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Gtf2a2Q80ZM7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms