Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Ush1gQ80T11 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ush1gQ80T11 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ush1gQ80T11 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ush1gQ80T11 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ush1gQ80T11 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Ush1gQ80T11 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ush1gQ80T11 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
Ush1gQ80T11 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.94■■■□□ 2.22
Ush1gQ80T11 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ush1gQ80T11 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ush1gQ80T11 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ush1gQ80T11 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ush1gQ80T11 Peli2-204ENSMUST00000226513 1320 ntBASIC28.9■■■□□ 2.22
Ush1gQ80T11 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Ush1gQ80T11 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Ush1gQ80T11 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ush1gQ80T11 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ush1gQ80T11 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.83■■■□□ 2.21
Ush1gQ80T11 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ush1gQ80T11 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.82■■■□□ 2.2
Ush1gQ80T11 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
Ush1gQ80T11 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ush1gQ80T11 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Ush1gQ80T11 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.79■■■□□ 2.2
Ush1gQ80T11 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Ush1gQ80T11 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.78■■■□□ 2.2
Ush1gQ80T11 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.78■■■□□ 2.2
Ush1gQ80T11 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Ush1gQ80T11 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ush1gQ80T11 Mipep-204ENSMUST00000225043 1548 ntBASIC28.74■■■□□ 2.19
Ush1gQ80T11 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ush1gQ80T11 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ush1gQ80T11 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ush1gQ80T11 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Ush1gQ80T11 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ush1gQ80T11 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ush1gQ80T11 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
Ush1gQ80T11 Gm45855-201ENSMUST00000212546 880 ntBASIC28.64■■■□□ 2.18
Ush1gQ80T11 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Ush1gQ80T11 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ush1gQ80T11 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ush1gQ80T11 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.57■■■□□ 2.16
Ush1gQ80T11 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Ush1gQ80T11 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ush1gQ80T11 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ush1gQ80T11 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ush1gQ80T11 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ush1gQ80T11 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ush1gQ80T11 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Ush1gQ80T11 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ush1gQ80T11 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ush1gQ80T11 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.47■■■□□ 2.15
Ush1gQ80T11 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.45■■■□□ 2.14
Ush1gQ80T11 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Ush1gQ80T11 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ush1gQ80T11 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Ush1gQ80T11 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.43■■■□□ 2.14
Ush1gQ80T11 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ush1gQ80T11 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Ush1gQ80T11 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Ush1gQ80T11 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ush1gQ80T11 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ush1gQ80T11 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ush1gQ80T11 Gm9397-201ENSMUST00000200125 605 ntBASIC28.35■■■□□ 2.13
Ush1gQ80T11 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ush1gQ80T11 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Ush1gQ80T11 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ush1gQ80T11 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ush1gQ80T11 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ush1gQ80T11 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.32■■■□□ 2.12
Ush1gQ80T11 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ush1gQ80T11 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
Ush1gQ80T11 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ush1gQ80T11 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ush1gQ80T11 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ush1gQ80T11 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ush1gQ80T11 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ush1gQ80T11 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.25■■■□□ 2.11
Ush1gQ80T11 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ush1gQ80T11 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ush1gQ80T11 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ush1gQ80T11 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ush1gQ80T11 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ush1gQ80T11 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Ush1gQ80T11 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.22■■■□□ 2.11
Ush1gQ80T11 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.22■■■□□ 2.11
Ush1gQ80T11 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ush1gQ80T11 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ush1gQ80T11 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
Ush1gQ80T11 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Ush1gQ80T11 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ush1gQ80T11 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.15■■■□□ 2.1
Ush1gQ80T11 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ush1gQ80T11 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.14■■■□□ 2.1
Ush1gQ80T11 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.1■■■□□ 2.09
Ush1gQ80T11 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.09■■■□□ 2.09
Ush1gQ80T11 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ush1gQ80T11 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ush1gQ80T11 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms