Protein–RNA interactions for Protein: Q6ZPZ3

Zc3h4, Zinc finger CCCH domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h4Q6ZPZ3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Zc3h4Q6ZPZ3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Zc3h4Q6ZPZ3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Zc3h4Q6ZPZ3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Zc3h4Q6ZPZ3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Zc3h4Q6ZPZ3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Zc3h4Q6ZPZ3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Zc3h4Q6ZPZ3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Zc3h4Q6ZPZ3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Zc3h4Q6ZPZ3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Zc3h4Q6ZPZ3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Zc3h4Q6ZPZ3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Zc3h4Q6ZPZ3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.3■■■□□ 2.44
Zc3h4Q6ZPZ3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Zc3h4Q6ZPZ3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Zc3h4Q6ZPZ3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Zc3h4Q6ZPZ3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Zc3h4Q6ZPZ3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Zc3h4Q6ZPZ3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Zc3h4Q6ZPZ3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Zc3h4Q6ZPZ3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Zc3h4Q6ZPZ3 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.25■■■□□ 2.43
Zc3h4Q6ZPZ3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
Zc3h4Q6ZPZ3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Zc3h4Q6ZPZ3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Zc3h4Q6ZPZ3 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.21■■■□□ 2.43
Zc3h4Q6ZPZ3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Zc3h4Q6ZPZ3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Zc3h4Q6ZPZ3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.17■■■□□ 2.42
Zc3h4Q6ZPZ3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.17■■■□□ 2.42
Zc3h4Q6ZPZ3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
Zc3h4Q6ZPZ3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Zc3h4Q6ZPZ3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.15■■■□□ 2.42
Zc3h4Q6ZPZ3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Zc3h4Q6ZPZ3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Zc3h4Q6ZPZ3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Zc3h4Q6ZPZ3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
Zc3h4Q6ZPZ3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.12■■■□□ 2.41
Zc3h4Q6ZPZ3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.12■■■□□ 2.41
Zc3h4Q6ZPZ3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.11■■■□□ 2.41
Zc3h4Q6ZPZ3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Zc3h4Q6ZPZ3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Zc3h4Q6ZPZ3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.08■■■□□ 2.41
Zc3h4Q6ZPZ3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Zc3h4Q6ZPZ3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Zc3h4Q6ZPZ3 Gm24970-201ENSMUST00000175582 82 ntBASIC30.06■■■□□ 2.4
Zc3h4Q6ZPZ3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Zc3h4Q6ZPZ3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Zc3h4Q6ZPZ3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Zc3h4Q6ZPZ3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Zc3h4Q6ZPZ3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.99■■■□□ 2.39
Zc3h4Q6ZPZ3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Zc3h4Q6ZPZ3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Zc3h4Q6ZPZ3 Mipep-204ENSMUST00000225043 1548 ntBASIC29.95■■■□□ 2.39
Zc3h4Q6ZPZ3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Zc3h4Q6ZPZ3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.94■■■□□ 2.38
Zc3h4Q6ZPZ3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Zc3h4Q6ZPZ3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Zc3h4Q6ZPZ3 Gm8503-201ENSMUST00000118131 455 ntBASIC29.86■■■□□ 2.37
Zc3h4Q6ZPZ3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Zc3h4Q6ZPZ3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
Zc3h4Q6ZPZ3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Zc3h4Q6ZPZ3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.83■■■□□ 2.37
Zc3h4Q6ZPZ3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.83■■■□□ 2.37
Zc3h4Q6ZPZ3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.83■■■□□ 2.37
Zc3h4Q6ZPZ3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.83■■■□□ 2.37
Zc3h4Q6ZPZ3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.83■■■□□ 2.37
Zc3h4Q6ZPZ3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
Zc3h4Q6ZPZ3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Zc3h4Q6ZPZ3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
Zc3h4Q6ZPZ3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Zc3h4Q6ZPZ3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.74■■■□□ 2.35
Zc3h4Q6ZPZ3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Zc3h4Q6ZPZ3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.69■■■□□ 2.34
Zc3h4Q6ZPZ3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.64■■■□□ 2.34
Zc3h4Q6ZPZ3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Zc3h4Q6ZPZ3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Zc3h4Q6ZPZ3 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.62■■■□□ 2.33
Zc3h4Q6ZPZ3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Zc3h4Q6ZPZ3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Zc3h4Q6ZPZ3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Zc3h4Q6ZPZ3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Zc3h4Q6ZPZ3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.54■■■□□ 2.32
Zc3h4Q6ZPZ3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Zc3h4Q6ZPZ3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Zc3h4Q6ZPZ3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.5■■■□□ 2.31
Zc3h4Q6ZPZ3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.49■■■□□ 2.31
Zc3h4Q6ZPZ3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Zc3h4Q6ZPZ3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Zc3h4Q6ZPZ3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Zc3h4Q6ZPZ3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Zc3h4Q6ZPZ3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Zc3h4Q6ZPZ3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.38■■■□□ 2.29
Zc3h4Q6ZPZ3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Zc3h4Q6ZPZ3 Gm6821-201ENSMUST00000107540 542 ntBASIC29.35■■■□□ 2.29
Zc3h4Q6ZPZ3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Zc3h4Q6ZPZ3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Zc3h4Q6ZPZ3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Zc3h4Q6ZPZ3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Zc3h4Q6ZPZ3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms