Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Scn10aQ6QIY3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scn10aQ6QIY3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.43■■■□□ 2.62
Scn10aQ6QIY3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Scn10aQ6QIY3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Scn10aQ6QIY3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.39■■■□□ 2.62
Scn10aQ6QIY3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.39■■■□□ 2.62
Scn10aQ6QIY3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Scn10aQ6QIY3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Scn10aQ6QIY3 Gm45855-201ENSMUST00000212546 880 ntBASIC31.34■■■□□ 2.61
Scn10aQ6QIY3 Mipep-204ENSMUST00000225043 1548 ntBASIC31.31■■■□□ 2.6
Scn10aQ6QIY3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Scn10aQ6QIY3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.3■■■□□ 2.6
Scn10aQ6QIY3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Scn10aQ6QIY3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.26■■■□□ 2.59
Scn10aQ6QIY3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scn10aQ6QIY3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Scn10aQ6QIY3 Gm9397-201ENSMUST00000200125 605 ntBASIC31.23■■■□□ 2.59
Scn10aQ6QIY3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Scn10aQ6QIY3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Scn10aQ6QIY3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Scn10aQ6QIY3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Scn10aQ6QIY3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Scn10aQ6QIY3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scn10aQ6QIY3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Scn10aQ6QIY3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scn10aQ6QIY3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Scn10aQ6QIY3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.11■■■□□ 2.57
Scn10aQ6QIY3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scn10aQ6QIY3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scn10aQ6QIY3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.09■■■□□ 2.57
Scn10aQ6QIY3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Scn10aQ6QIY3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Scn10aQ6QIY3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.05■■■□□ 2.56
Scn10aQ6QIY3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Scn10aQ6QIY3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Scn10aQ6QIY3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Scn10aQ6QIY3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Scn10aQ6QIY3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Scn10aQ6QIY3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Scn10aQ6QIY3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Scn10aQ6QIY3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
Scn10aQ6QIY3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.96■■■□□ 2.55
Scn10aQ6QIY3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Scn10aQ6QIY3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
Scn10aQ6QIY3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.94■■■□□ 2.54
Scn10aQ6QIY3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Scn10aQ6QIY3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scn10aQ6QIY3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Scn10aQ6QIY3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scn10aQ6QIY3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.9■■■□□ 2.54
Scn10aQ6QIY3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.88■■■□□ 2.53
Scn10aQ6QIY3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Scn10aQ6QIY3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Scn10aQ6QIY3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Scn10aQ6QIY3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Scn10aQ6QIY3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.8■■■□□ 2.52
Scn10aQ6QIY3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.79■■■□□ 2.52
Scn10aQ6QIY3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Scn10aQ6QIY3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scn10aQ6QIY3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scn10aQ6QIY3 Gm24970-201ENSMUST00000175582 82 ntBASIC30.76■■■□□ 2.51
Scn10aQ6QIY3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Scn10aQ6QIY3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scn10aQ6QIY3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scn10aQ6QIY3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.72■■■□□ 2.51
Scn10aQ6QIY3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.71■■■□□ 2.51
Scn10aQ6QIY3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Scn10aQ6QIY3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Scn10aQ6QIY3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.69■■■□□ 2.5
Scn10aQ6QIY3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn10aQ6QIY3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn10aQ6QIY3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn10aQ6QIY3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Scn10aQ6QIY3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Scn10aQ6QIY3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.64■■■□□ 2.5
Scn10aQ6QIY3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.63■■■□□ 2.49
Scn10aQ6QIY3 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.62■■■□□ 2.49
Scn10aQ6QIY3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.62■■■□□ 2.49
Scn10aQ6QIY3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Scn10aQ6QIY3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Scn10aQ6QIY3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Scn10aQ6QIY3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Scn10aQ6QIY3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Scn10aQ6QIY3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Scn10aQ6QIY3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Scn10aQ6QIY3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Scn10aQ6QIY3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Scn10aQ6QIY3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Gm8503-201ENSMUST00000118131 455 ntBASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Scn10aQ6QIY3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Scn10aQ6QIY3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Scn10aQ6QIY3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scn10aQ6QIY3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scn10aQ6QIY3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.42■■■□□ 2.46
Scn10aQ6QIY3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Scn10aQ6QIY3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms