Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
Ltn1Q6A009 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.55■■■□□ 2.8
Ltn1Q6A009 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Ltn1Q6A009 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.53■■■□□ 2.8
Ltn1Q6A009 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.53■■■□□ 2.8
Ltn1Q6A009 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.5■■■□□ 2.79
Ltn1Q6A009 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ltn1Q6A009 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ltn1Q6A009 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ltn1Q6A009 Mipep-204ENSMUST00000225043 1548 ntBASIC32.47■■■□□ 2.79
Ltn1Q6A009 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ltn1Q6A009 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Ltn1Q6A009 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
Ltn1Q6A009 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ltn1Q6A009 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ltn1Q6A009 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ltn1Q6A009 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
Ltn1Q6A009 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ltn1Q6A009 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.35■■■□□ 2.77
Ltn1Q6A009 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ltn1Q6A009 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ltn1Q6A009 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.32■■■□□ 2.76
Ltn1Q6A009 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ltn1Q6A009 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.27■■■□□ 2.76
Ltn1Q6A009 Gm45855-201ENSMUST00000212546 880 ntBASIC32.27■■■□□ 2.76
Ltn1Q6A009 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Ltn1Q6A009 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ltn1Q6A009 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.22■■■□□ 2.75
Ltn1Q6A009 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
Ltn1Q6A009 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.19■■■□□ 2.74
Ltn1Q6A009 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ltn1Q6A009 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ltn1Q6A009 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ltn1Q6A009 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ltn1Q6A009 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Ltn1Q6A009 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ltn1Q6A009 Gm9397-201ENSMUST00000200125 605 ntBASIC32.14■■■□□ 2.74
Ltn1Q6A009 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ltn1Q6A009 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ltn1Q6A009 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ltn1Q6A009 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Ltn1Q6A009 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
Ltn1Q6A009 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ltn1Q6A009 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ltn1Q6A009 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.02■■■□□ 2.72
Ltn1Q6A009 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ltn1Q6A009 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ltn1Q6A009 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ltn1Q6A009 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.96■■■□□ 2.71
Ltn1Q6A009 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ltn1Q6A009 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Ltn1Q6A009 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ltn1Q6A009 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ltn1Q6A009 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ltn1Q6A009 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
Ltn1Q6A009 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.9■■■□□ 2.7
Ltn1Q6A009 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.89■■■□□ 2.69
Ltn1Q6A009 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ltn1Q6A009 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ltn1Q6A009 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ltn1Q6A009 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ltn1Q6A009 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ltn1Q6A009 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.81■■■□□ 2.68
Ltn1Q6A009 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Ltn1Q6A009 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ltn1Q6A009 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ltn1Q6A009 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.79■■■□□ 2.68
Ltn1Q6A009 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ltn1Q6A009 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ltn1Q6A009 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.79■■■□□ 2.68
Ltn1Q6A009 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ltn1Q6A009 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ltn1Q6A009 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ltn1Q6A009 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ltn1Q6A009 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Ltn1Q6A009 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ltn1Q6A009 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.73■■■□□ 2.67
Ltn1Q6A009 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ltn1Q6A009 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ltn1Q6A009 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
Ltn1Q6A009 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.68■■■□□ 2.66
Ltn1Q6A009 Gm24970-201ENSMUST00000175582 82 ntBASIC31.66■■■□□ 2.66
Ltn1Q6A009 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ltn1Q6A009 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.63■■■□□ 2.65
Ltn1Q6A009 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Ltn1Q6A009 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
Ltn1Q6A009 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.59■■■□□ 2.65
Ltn1Q6A009 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Ltn1Q6A009 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ltn1Q6A009 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ltn1Q6A009 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ltn1Q6A009 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ltn1Q6A009 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.53■■■□□ 2.64
Ltn1Q6A009 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Ltn1Q6A009 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ltn1Q6A009 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Ltn1Q6A009 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ltn1Q6A009 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Ltn1Q6A009 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ltn1Q6A009 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.47■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms