Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27,55■■■□□ 2
Col12a1Q60847 Peli2-204ENSMUST00000226513 1320 ntBASIC27,55■■■□□ 2
Col12a1Q60847 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27,54■■■□□ 2
Col12a1Q60847 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,53■■■□□ 2
Col12a1Q60847 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27,52■■■□□ 2
Col12a1Q60847 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27,52■■■□□ 2
Col12a1Q60847 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
Col12a1Q60847 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27,51■■□□□ 1,99
Col12a1Q60847 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
Col12a1Q60847 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27,5■■□□□ 1,99
Col12a1Q60847 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27,47■■□□□ 1,99
Col12a1Q60847 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27,46■■□□□ 1,99
Col12a1Q60847 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27,46■■□□□ 1,99
Col12a1Q60847 Gm9397-201ENSMUST00000200125 605 ntBASIC27,45■■□□□ 1,99
Col12a1Q60847 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27,45■■□□□ 1,98
Col12a1Q60847 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27,44■■□□□ 1,98
Col12a1Q60847 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27,43■■□□□ 1,98
Col12a1Q60847 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,42■■□□□ 1,98
Col12a1Q60847 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27,42■■□□□ 1,98
Col12a1Q60847 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27,41■■□□□ 1,98
Col12a1Q60847 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27,4■■□□□ 1,98
Col12a1Q60847 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27,4■■□□□ 1,98
Col12a1Q60847 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27,38■■□□□ 1,97
Col12a1Q60847 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27,37■■□□□ 1,97
Col12a1Q60847 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27,37■■□□□ 1,97
Col12a1Q60847 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27,35■■□□□ 1,97
Col12a1Q60847 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,33■■□□□ 1,97
Col12a1Q60847 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27,32■■□□□ 1,96
Col12a1Q60847 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27,3■■□□□ 1,96
Col12a1Q60847 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27,3■■□□□ 1,96
Col12a1Q60847 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27,3■■□□□ 1,96
Col12a1Q60847 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27,29■■□□□ 1,96
Col12a1Q60847 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,28■■□□□ 1,96
Col12a1Q60847 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27,27■■□□□ 1,96
Col12a1Q60847 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27,26■■□□□ 1,95
Col12a1Q60847 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27,24■■□□□ 1,95
Col12a1Q60847 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27,21■■□□□ 1,95
Col12a1Q60847 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Col12a1Q60847 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27,16■■□□□ 1,94
Col12a1Q60847 Gm8503-201ENSMUST00000118131 455 ntBASIC27,16■■□□□ 1,94
Col12a1Q60847 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27,15■■□□□ 1,94
Col12a1Q60847 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27,14■■□□□ 1,94
Col12a1Q60847 Zfp131-207ENSMUST00000224946 1783 ntBASIC27,13■■□□□ 1,93
Col12a1Q60847 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27,11■■□□□ 1,93
Col12a1Q60847 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27,07■■□□□ 1,92
Col12a1Q60847 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27,05■■□□□ 1,92
Col12a1Q60847 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27,04■■□□□ 1,92
Col12a1Q60847 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Col12a1Q60847 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Col12a1Q60847 Gm9939-201ENSMUST00000067161 1154 ntBASIC27,01■■□□□ 1,91
Col12a1Q60847 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27,01■■□□□ 1,91
Col12a1Q60847 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27■■□□□ 1,91
Col12a1Q60847 Gm24970-201ENSMUST00000175582 82 ntBASIC27■■□□□ 1,91
Col12a1Q60847 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Col12a1Q60847 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Col12a1Q60847 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
Col12a1Q60847 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,9
Col12a1Q60847 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Col12a1Q60847 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Col12a1Q60847 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26,92■■□□□ 1,9
Col12a1Q60847 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Col12a1Q60847 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26,91■■□□□ 1,9
Col12a1Q60847 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26,9■■□□□ 1,9
Col12a1Q60847 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26,89■■□□□ 1,9
Col12a1Q60847 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,89■■□□□ 1,89
Col12a1Q60847 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26,88■■□□□ 1,89
Col12a1Q60847 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Col12a1Q60847 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26,85■■□□□ 1,89
Col12a1Q60847 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26,83■■□□□ 1,89
Col12a1Q60847 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,78■■□□□ 1,88
Col12a1Q60847 Gm6821-201ENSMUST00000107540 542 ntBASIC26,77■■□□□ 1,88
Col12a1Q60847 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26,75■■□□□ 1,87
Col12a1Q60847 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Col12a1Q60847 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26,73■■□□□ 1,87
Col12a1Q60847 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Col12a1Q60847 Mipep-204ENSMUST00000225043 1548 ntBASIC26,71■■□□□ 1,87
Col12a1Q60847 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26,7■■□□□ 1,86
Col12a1Q60847 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26,7■■□□□ 1,86
Col12a1Q60847 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26,67■■□□□ 1,86
Col12a1Q60847 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Col12a1Q60847 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Col12a1Q60847 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26,62■■□□□ 1,85
Col12a1Q60847 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26,61■■□□□ 1,85
Col12a1Q60847 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Col12a1Q60847 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Col12a1Q60847 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Col12a1Q60847 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Col12a1Q60847 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Col12a1Q60847 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26,51■■□□□ 1,83
Col12a1Q60847 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26,49■■□□□ 1,83
Col12a1Q60847 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26,48■■□□□ 1,83
Col12a1Q60847 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26,46■■□□□ 1,83
Col12a1Q60847 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26,46■■□□□ 1,83
Col12a1Q60847 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26,45■■□□□ 1,83
Col12a1Q60847 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26,43■■□□□ 1,82
Col12a1Q60847 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Col12a1Q60847 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26,42■■□□□ 1,82
Col12a1Q60847 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26,42■■□□□ 1,82
Col12a1Q60847 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Col12a1Q60847 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Retrieved 100 of 76,532 protein–RNA pairs in 9,5 ms