Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Srrm1Q52KI8 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.24■■■□□ 2.43
Srrm1Q52KI8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Srrm1Q52KI8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Srrm1Q52KI8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Srrm1Q52KI8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.15■■■□□ 2.42
Srrm1Q52KI8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Srrm1Q52KI8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Srrm1Q52KI8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
Srrm1Q52KI8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Srrm1Q52KI8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Srrm1Q52KI8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Srrm1Q52KI8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Srrm1Q52KI8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.04■■■□□ 2.4
Srrm1Q52KI8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Srrm1Q52KI8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Srrm1Q52KI8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Srrm1Q52KI8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30■■■□□ 2.39
Srrm1Q52KI8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.99■■■□□ 2.39
Srrm1Q52KI8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Srrm1Q52KI8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Srrm1Q52KI8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Srrm1Q52KI8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Srrm1Q52KI8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Srrm1Q52KI8 Mipep-204ENSMUST00000225043 1548 ntBASIC29.95■■■□□ 2.38
Srrm1Q52KI8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Srrm1Q52KI8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Srrm1Q52KI8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Srrm1Q52KI8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Srrm1Q52KI8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Srrm1Q52KI8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.91■■■□□ 2.38
Srrm1Q52KI8 Gm9397-201ENSMUST00000200125 605 ntBASIC29.91■■■□□ 2.38
Srrm1Q52KI8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
Srrm1Q52KI8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
Srrm1Q52KI8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Srrm1Q52KI8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.87■■■□□ 2.37
Srrm1Q52KI8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Srrm1Q52KI8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Srrm1Q52KI8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Srrm1Q52KI8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Srrm1Q52KI8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Srrm1Q52KI8 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.82■■■□□ 2.36
Srrm1Q52KI8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
Srrm1Q52KI8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.8■■■□□ 2.36
Srrm1Q52KI8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Srrm1Q52KI8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Srrm1Q52KI8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Srrm1Q52KI8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Srrm1Q52KI8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.75■■■□□ 2.35
Srrm1Q52KI8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Srrm1Q52KI8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Srrm1Q52KI8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.73■■■□□ 2.35
Srrm1Q52KI8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Srrm1Q52KI8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.68■■■□□ 2.34
Srrm1Q52KI8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Srrm1Q52KI8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Srrm1Q52KI8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Srrm1Q52KI8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.62■■■□□ 2.33
Srrm1Q52KI8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.62■■■□□ 2.33
Srrm1Q52KI8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.62■■■□□ 2.33
Srrm1Q52KI8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Srrm1Q52KI8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Srrm1Q52KI8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Srrm1Q52KI8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.57■■■□□ 2.32
Srrm1Q52KI8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Srrm1Q52KI8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Srrm1Q52KI8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.54■■■□□ 2.32
Srrm1Q52KI8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.54■■■□□ 2.32
Srrm1Q52KI8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Srrm1Q52KI8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Srrm1Q52KI8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Srrm1Q52KI8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.46■■■□□ 2.31
Srrm1Q52KI8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Srrm1Q52KI8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.4■■■□□ 2.3
Srrm1Q52KI8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
Srrm1Q52KI8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
Srrm1Q52KI8 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.38■■■□□ 2.29
Srrm1Q52KI8 Gm24970-201ENSMUST00000175582 82 ntBASIC29.37■■■□□ 2.29
Srrm1Q52KI8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Srrm1Q52KI8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Srrm1Q52KI8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Srrm1Q52KI8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Srrm1Q52KI8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Srrm1Q52KI8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.3■■■□□ 2.28
Srrm1Q52KI8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.3■■■□□ 2.28
Srrm1Q52KI8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.28■■■□□ 2.28
Srrm1Q52KI8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Srrm1Q52KI8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Srrm1Q52KI8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Srrm1Q52KI8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Srrm1Q52KI8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Srrm1Q52KI8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.21■■■□□ 2.27
Srrm1Q52KI8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Srrm1Q52KI8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.19■■■□□ 2.26
Srrm1Q52KI8 Gm8503-201ENSMUST00000118131 455 ntBASIC29.18■■■□□ 2.26
Srrm1Q52KI8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Srrm1Q52KI8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Srrm1Q52KI8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Srrm1Q52KI8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Srrm1Q52KI8 Gm6821-201ENSMUST00000107540 542 ntBASIC29.14■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms