Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Usp48Q3V0C5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Usp48Q3V0C5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Usp48Q3V0C5 Gm45855-201ENSMUST00000212546 880 ntBASIC32.69■■■□□ 2.82
Usp48Q3V0C5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Usp48Q3V0C5 Peli2-204ENSMUST00000226513 1320 ntBASIC32.65■■■□□ 2.82
Usp48Q3V0C5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Usp48Q3V0C5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Usp48Q3V0C5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Usp48Q3V0C5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.62■■■□□ 2.81
Usp48Q3V0C5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Usp48Q3V0C5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Usp48Q3V0C5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Usp48Q3V0C5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Usp48Q3V0C5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Usp48Q3V0C5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Usp48Q3V0C5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Usp48Q3V0C5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Usp48Q3V0C5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Usp48Q3V0C5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Usp48Q3V0C5 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.45■■■□□ 2.79
Usp48Q3V0C5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Usp48Q3V0C5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Usp48Q3V0C5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Usp48Q3V0C5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Usp48Q3V0C5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Usp48Q3V0C5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Usp48Q3V0C5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Usp48Q3V0C5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Usp48Q3V0C5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.34■■■□□ 2.77
Usp48Q3V0C5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.34■■■□□ 2.77
Usp48Q3V0C5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Usp48Q3V0C5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Usp48Q3V0C5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Usp48Q3V0C5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Usp48Q3V0C5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Usp48Q3V0C5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
Usp48Q3V0C5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
Usp48Q3V0C5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.28■■■□□ 2.76
Usp48Q3V0C5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Usp48Q3V0C5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Usp48Q3V0C5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Usp48Q3V0C5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Usp48Q3V0C5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
Usp48Q3V0C5 Gm9397-201ENSMUST00000200125 605 ntBASIC32.25■■■□□ 2.75
Usp48Q3V0C5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Usp48Q3V0C5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Usp48Q3V0C5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Usp48Q3V0C5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Usp48Q3V0C5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Usp48Q3V0C5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Usp48Q3V0C5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.74
Usp48Q3V0C5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Usp48Q3V0C5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Usp48Q3V0C5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.14■■■□□ 2.74
Usp48Q3V0C5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.14■■■□□ 2.74
Usp48Q3V0C5 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.12■■■□□ 2.73
Usp48Q3V0C5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.11■■■□□ 2.73
Usp48Q3V0C5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Usp48Q3V0C5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Usp48Q3V0C5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Usp48Q3V0C5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.09■■■□□ 2.73
Usp48Q3V0C5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Usp48Q3V0C5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Usp48Q3V0C5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Usp48Q3V0C5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Usp48Q3V0C5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.04■■■□□ 2.72
Usp48Q3V0C5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.03■■■□□ 2.72
Usp48Q3V0C5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.03■■■□□ 2.72
Usp48Q3V0C5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Usp48Q3V0C5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.02■■■□□ 2.72
Usp48Q3V0C5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Usp48Q3V0C5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Usp48Q3V0C5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Usp48Q3V0C5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.92■■■□□ 2.7
Usp48Q3V0C5 Mipep-204ENSMUST00000225043 1548 ntBASIC31.91■■■□□ 2.7
Usp48Q3V0C5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.91■■■□□ 2.7
Usp48Q3V0C5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.9■■■□□ 2.7
Usp48Q3V0C5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Usp48Q3V0C5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Usp48Q3V0C5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Usp48Q3V0C5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Usp48Q3V0C5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Usp48Q3V0C5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp48Q3V0C5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp48Q3V0C5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Usp48Q3V0C5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.83■■■□□ 2.69
Usp48Q3V0C5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Usp48Q3V0C5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Usp48Q3V0C5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Usp48Q3V0C5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.75■■■□□ 2.67
Usp48Q3V0C5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.74■■■□□ 2.67
Usp48Q3V0C5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Usp48Q3V0C5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Usp48Q3V0C5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Usp48Q3V0C5 Gm24970-201ENSMUST00000175582 82 ntBASIC31.71■■■□□ 2.67
Usp48Q3V0C5 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.71■■■□□ 2.67
Usp48Q3V0C5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Usp48Q3V0C5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.69■■■□□ 2.66
Usp48Q3V0C5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms