Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Pdlim7Q3TJD7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Pdlim7Q3TJD7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pdlim7Q3TJD7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pdlim7Q3TJD7 Gm45855-201ENSMUST00000212546 880 ntBASIC30.61■■■□□ 2.49
Pdlim7Q3TJD7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pdlim7Q3TJD7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.52■■■□□ 2.48
Pdlim7Q3TJD7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.51■■■□□ 2.47
Pdlim7Q3TJD7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.51■■■□□ 2.47
Pdlim7Q3TJD7 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.49■■■□□ 2.47
Pdlim7Q3TJD7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Pdlim7Q3TJD7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pdlim7Q3TJD7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pdlim7Q3TJD7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Pdlim7Q3TJD7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Pdlim7Q3TJD7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pdlim7Q3TJD7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Pdlim7Q3TJD7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pdlim7Q3TJD7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pdlim7Q3TJD7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Pdlim7Q3TJD7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pdlim7Q3TJD7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pdlim7Q3TJD7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Pdlim7Q3TJD7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Pdlim7Q3TJD7 Gm9397-201ENSMUST00000200125 605 ntBASIC30.29■■■□□ 2.44
Pdlim7Q3TJD7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Pdlim7Q3TJD7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pdlim7Q3TJD7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.28■■■□□ 2.44
Pdlim7Q3TJD7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Pdlim7Q3TJD7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pdlim7Q3TJD7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pdlim7Q3TJD7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.24■■■□□ 2.43
Pdlim7Q3TJD7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Pdlim7Q3TJD7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pdlim7Q3TJD7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Pdlim7Q3TJD7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Pdlim7Q3TJD7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pdlim7Q3TJD7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pdlim7Q3TJD7 Mipep-204ENSMUST00000225043 1548 ntBASIC30.21■■■□□ 2.43
Pdlim7Q3TJD7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
Pdlim7Q3TJD7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.2■■■□□ 2.43
Pdlim7Q3TJD7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pdlim7Q3TJD7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pdlim7Q3TJD7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
Pdlim7Q3TJD7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
Pdlim7Q3TJD7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Pdlim7Q3TJD7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Pdlim7Q3TJD7 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.14■■■□□ 2.42
Pdlim7Q3TJD7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pdlim7Q3TJD7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pdlim7Q3TJD7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pdlim7Q3TJD7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.11■■■□□ 2.41
Pdlim7Q3TJD7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Pdlim7Q3TJD7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Pdlim7Q3TJD7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pdlim7Q3TJD7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pdlim7Q3TJD7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.08■■■□□ 2.41
Pdlim7Q3TJD7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.07■■■□□ 2.4
Pdlim7Q3TJD7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Pdlim7Q3TJD7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Pdlim7Q3TJD7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pdlim7Q3TJD7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pdlim7Q3TJD7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30■■■□□ 2.39
Pdlim7Q3TJD7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Pdlim7Q3TJD7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.98■■■□□ 2.39
Pdlim7Q3TJD7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pdlim7Q3TJD7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Pdlim7Q3TJD7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.97■■■□□ 2.39
Pdlim7Q3TJD7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.95■■■□□ 2.39
Pdlim7Q3TJD7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pdlim7Q3TJD7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.92■■■□□ 2.38
Pdlim7Q3TJD7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Pdlim7Q3TJD7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.9■■■□□ 2.38
Pdlim7Q3TJD7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pdlim7Q3TJD7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Pdlim7Q3TJD7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.87■■■□□ 2.37
Pdlim7Q3TJD7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.84■■■□□ 2.37
Pdlim7Q3TJD7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Pdlim7Q3TJD7 Gm24970-201ENSMUST00000175582 82 ntBASIC29.79■■■□□ 2.36
Pdlim7Q3TJD7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.79■■■□□ 2.36
Pdlim7Q3TJD7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pdlim7Q3TJD7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pdlim7Q3TJD7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Pdlim7Q3TJD7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
Pdlim7Q3TJD7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pdlim7Q3TJD7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Pdlim7Q3TJD7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.67■■■□□ 2.34
Pdlim7Q3TJD7 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.67■■■□□ 2.34
Pdlim7Q3TJD7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pdlim7Q3TJD7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pdlim7Q3TJD7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pdlim7Q3TJD7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pdlim7Q3TJD7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Pdlim7Q3TJD7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.64■■■□□ 2.33
Pdlim7Q3TJD7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.63■■■□□ 2.33
Pdlim7Q3TJD7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.6■■■□□ 2.33
Pdlim7Q3TJD7 Gm8503-201ENSMUST00000118131 455 ntBASIC29.59■■■□□ 2.33
Pdlim7Q3TJD7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.59■■■□□ 2.33
Pdlim7Q3TJD7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pdlim7Q3TJD7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms