Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
Kdm5cP41230 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC40.28■■■■■ 4.04
Kdm5cP41230 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Kdm5cP41230 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Kdm5cP41230 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC40.26■■■■■ 4.04
Kdm5cP41230 Gm45855-201ENSMUST00000212546 880 ntBASIC40.2■■■■■ 4.03
Kdm5cP41230 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Kdm5cP41230 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC40.16■■■■■ 4.02
Kdm5cP41230 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC40.12■■■■■ 4.01
Kdm5cP41230 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Kdm5cP41230 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
Kdm5cP41230 Gm9397-201ENSMUST00000200125 605 ntBASIC40.07■■■■■ 4.01
Kdm5cP41230 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC40.06■■■■■ 4
Kdm5cP41230 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■□ 3.99
Kdm5cP41230 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC40■■■■□ 3.99
Kdm5cP41230 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Kdm5cP41230 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC39.92■■■■□ 3.98
Kdm5cP41230 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC39.92■■■■□ 3.98
Kdm5cP41230 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
Kdm5cP41230 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC39.9■■■■□ 3.98
Kdm5cP41230 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
Kdm5cP41230 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC39.88■■■■□ 3.98
Kdm5cP41230 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
Kdm5cP41230 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
Kdm5cP41230 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Kdm5cP41230 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC39.84■■■■□ 3.97
Kdm5cP41230 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Kdm5cP41230 Mipep-204ENSMUST00000225043 1548 ntBASIC39.82■■■■□ 3.96
Kdm5cP41230 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Kdm5cP41230 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
Kdm5cP41230 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC39.8■■■■□ 3.96
Kdm5cP41230 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC39.78■■■■□ 3.96
Kdm5cP41230 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC39.76■■■■□ 3.96
Kdm5cP41230 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC39.76■■■■□ 3.95
Kdm5cP41230 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.95
Kdm5cP41230 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.95
Kdm5cP41230 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Kdm5cP41230 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC39.69■■■■□ 3.94
Kdm5cP41230 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
Kdm5cP41230 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC39.69■■■■□ 3.94
Kdm5cP41230 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC39.68■■■■□ 3.94
Kdm5cP41230 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC39.67■■■■□ 3.94
Kdm5cP41230 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
Kdm5cP41230 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Kdm5cP41230 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
Kdm5cP41230 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Kdm5cP41230 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC39.64■■■■□ 3.94
Kdm5cP41230 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Kdm5cP41230 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
Kdm5cP41230 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC39.61■■■■□ 3.93
Kdm5cP41230 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
Kdm5cP41230 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC39.56■■■■□ 3.92
Kdm5cP41230 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC39.55■■■■□ 3.92
Kdm5cP41230 Gm5987-201ENSMUST00000196433 1151 ntBASIC39.54■■■■□ 3.92
Kdm5cP41230 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
Kdm5cP41230 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC39.52■■■■□ 3.92
Kdm5cP41230 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Kdm5cP41230 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC39.47■■■■□ 3.91
Kdm5cP41230 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
Kdm5cP41230 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC39.46■■■■□ 3.91
Kdm5cP41230 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
Kdm5cP41230 Gm24970-201ENSMUST00000175582 82 ntBASIC39.43■■■■□ 3.9
Kdm5cP41230 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC39.42■■■■□ 3.9
Kdm5cP41230 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
Kdm5cP41230 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC39.37■■■■□ 3.89
Kdm5cP41230 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC39.34■■■■□ 3.89
Kdm5cP41230 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC39.33■■■■□ 3.89
Kdm5cP41230 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC39.32■■■■□ 3.88
Kdm5cP41230 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
Kdm5cP41230 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
Kdm5cP41230 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC39.21■■■■□ 3.87
Kdm5cP41230 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Kdm5cP41230 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
Kdm5cP41230 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC39.16■■■■□ 3.86
Kdm5cP41230 Gm8503-201ENSMUST00000118131 455 ntBASIC39.15■■■■□ 3.86
Kdm5cP41230 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC39.14■■■■□ 3.86
Kdm5cP41230 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC39.13■■■■□ 3.86
Kdm5cP41230 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Kdm5cP41230 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC39.07■■■■□ 3.85
Kdm5cP41230 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
Kdm5cP41230 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC39.02■■■■□ 3.84
Kdm5cP41230 Gm9939-201ENSMUST00000067161 1154 ntBASIC39.02■■■■□ 3.84
Kdm5cP41230 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC39.01■■■■□ 3.84
Kdm5cP41230 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC38.99■■■■□ 3.83
Kdm5cP41230 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Kdm5cP41230 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC38.98■■■■□ 3.83
Kdm5cP41230 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC38.97■■■■□ 3.83
Kdm5cP41230 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC38.93■■■■□ 3.82
Kdm5cP41230 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Kdm5cP41230 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
Kdm5cP41230 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC38.89■■■■□ 3.82
Kdm5cP41230 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
Kdm5cP41230 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
Kdm5cP41230 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
Kdm5cP41230 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
Kdm5cP41230 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
Kdm5cP41230 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC38.84■■■■□ 3.81
Kdm5cP41230 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
Kdm5cP41230 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Kdm5cP41230 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms