Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cxcl12P40224 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cxcl12P40224 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cxcl12P40224 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cxcl12P40224 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cxcl12P40224 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Cxcl12P40224 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Cxcl12P40224 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Cxcl12P40224 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.22■■■□□ 2.11
Cxcl12P40224 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cxcl12P40224 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Cxcl12P40224 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Cxcl12P40224 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Cxcl12P40224 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cxcl12P40224 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cxcl12P40224 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.18■■■□□ 2.1
Cxcl12P40224 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cxcl12P40224 Gm9397-201ENSMUST00000200125 605 ntBASIC28.16■■■□□ 2.1
Cxcl12P40224 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cxcl12P40224 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cxcl12P40224 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cxcl12P40224 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Cxcl12P40224 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.13■■■□□ 2.09
Cxcl12P40224 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cxcl12P40224 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
Cxcl12P40224 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.08■■■□□ 2.09
Cxcl12P40224 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cxcl12P40224 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cxcl12P40224 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.06■■■□□ 2.08
Cxcl12P40224 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cxcl12P40224 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cxcl12P40224 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.04■■■□□ 2.08
Cxcl12P40224 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.02■■■□□ 2.08
Cxcl12P40224 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Cxcl12P40224 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Cxcl12P40224 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Cxcl12P40224 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Cxcl12P40224 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28■■■□□ 2.07
Cxcl12P40224 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Cxcl12P40224 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Cxcl12P40224 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.98■■■□□ 2.07
Cxcl12P40224 Mipep-204ENSMUST00000225043 1548 ntBASIC27.97■■■□□ 2.07
Cxcl12P40224 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.96■■■□□ 2.07
Cxcl12P40224 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Cxcl12P40224 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Cxcl12P40224 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Cxcl12P40224 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Cxcl12P40224 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Cxcl12P40224 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.91■■■□□ 2.06
Cxcl12P40224 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.88■■■□□ 2.05
Cxcl12P40224 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.87■■■□□ 2.05
Cxcl12P40224 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Cxcl12P40224 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cxcl12P40224 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.84■■■□□ 2.05
Cxcl12P40224 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.8■■■□□ 2.04
Cxcl12P40224 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Cxcl12P40224 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cxcl12P40224 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cxcl12P40224 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.76■■■□□ 2.03
Cxcl12P40224 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cxcl12P40224 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Cxcl12P40224 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
Cxcl12P40224 Gm24970-201ENSMUST00000175582 82 ntBASIC27.72■■■□□ 2.03
Cxcl12P40224 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cxcl12P40224 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Cxcl12P40224 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.68■■■□□ 2.02
Cxcl12P40224 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.67■■■□□ 2.02
Cxcl12P40224 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cxcl12P40224 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cxcl12P40224 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.61■■■□□ 2.01
Cxcl12P40224 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.61■■■□□ 2.01
Cxcl12P40224 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Cxcl12P40224 Gm8503-201ENSMUST00000118131 455 ntBASIC27.57■■■□□ 2
Cxcl12P40224 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.55■■■□□ 2
Cxcl12P40224 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.53■■■□□ 2
Cxcl12P40224 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.51■■□□□ 1.99
Cxcl12P40224 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cxcl12P40224 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cxcl12P40224 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cxcl12P40224 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cxcl12P40224 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cxcl12P40224 Gm6821-201ENSMUST00000107540 542 ntBASIC27.45■■□□□ 1.98
Cxcl12P40224 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.45■■□□□ 1.98
Cxcl12P40224 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cxcl12P40224 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.42■■□□□ 1.98
Cxcl12P40224 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cxcl12P40224 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cxcl12P40224 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Cxcl12P40224 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cxcl12P40224 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cxcl12P40224 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Cxcl12P40224 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Cxcl12P40224 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cxcl12P40224 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cxcl12P40224 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Cxcl12P40224 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.23■■□□□ 1.95
Cxcl12P40224 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.22■■□□□ 1.95
Cxcl12P40224 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cxcl12P40224 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cxcl12P40224 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms