Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Syn1O88935 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Syn1O88935 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Syn1O88935 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Syn1O88935 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Syn1O88935 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Syn1O88935 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Syn1O88935 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.92■■■□□ 2.06
Syn1O88935 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Syn1O88935 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Syn1O88935 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Syn1O88935 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Syn1O88935 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Syn1O88935 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
Syn1O88935 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Syn1O88935 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Syn1O88935 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Syn1O88935 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.84■■■□□ 2.05
Syn1O88935 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Syn1O88935 Gm9397-201ENSMUST00000200125 605 ntBASIC27.82■■■□□ 2.04
Syn1O88935 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Syn1O88935 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Syn1O88935 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Syn1O88935 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.75■■■□□ 2.03
Syn1O88935 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.74■■■□□ 2.03
Syn1O88935 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Syn1O88935 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Syn1O88935 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Syn1O88935 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
Syn1O88935 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Syn1O88935 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
Syn1O88935 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.7■■■□□ 2.02
Syn1O88935 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.7■■■□□ 2.02
Syn1O88935 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Syn1O88935 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Syn1O88935 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.66■■■□□ 2.02
Syn1O88935 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Syn1O88935 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.64■■■□□ 2.02
Syn1O88935 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Syn1O88935 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.61■■■□□ 2.01
Syn1O88935 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Syn1O88935 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Syn1O88935 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Syn1O88935 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.56■■■□□ 2
Syn1O88935 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Syn1O88935 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.52■■■□□ 2
Syn1O88935 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Syn1O88935 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Syn1O88935 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Syn1O88935 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.48■■□□□ 1.99
Syn1O88935 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Syn1O88935 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.47■■□□□ 1.99
Syn1O88935 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.47■■□□□ 1.99
Syn1O88935 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.46■■□□□ 1.99
Syn1O88935 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Syn1O88935 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Syn1O88935 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Syn1O88935 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.44■■□□□ 1.98
Syn1O88935 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Syn1O88935 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Syn1O88935 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Syn1O88935 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Syn1O88935 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Syn1O88935 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Syn1O88935 Gm8503-201ENSMUST00000118131 455 ntBASIC27.35■■□□□ 1.97
Syn1O88935 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.31■■□□□ 1.96
Syn1O88935 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
Syn1O88935 Gm24970-201ENSMUST00000175582 82 ntBASIC27.3■■□□□ 1.96
Syn1O88935 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.29■■□□□ 1.96
Syn1O88935 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Syn1O88935 Gm6821-201ENSMUST00000107540 542 ntBASIC27.25■■□□□ 1.95
Syn1O88935 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Syn1O88935 Mipep-204ENSMUST00000225043 1548 ntBASIC27.24■■□□□ 1.95
Syn1O88935 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Syn1O88935 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Syn1O88935 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Syn1O88935 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Syn1O88935 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Syn1O88935 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Syn1O88935 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Syn1O88935 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.05■■□□□ 1.92
Syn1O88935 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.05■■□□□ 1.92
Syn1O88935 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Syn1O88935 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Syn1O88935 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Syn1O88935 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27■■□□□ 1.91
Syn1O88935 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Syn1O88935 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.98■■□□□ 1.91
Syn1O88935 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Syn1O88935 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Syn1O88935 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Syn1O88935 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Syn1O88935 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Syn1O88935 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Syn1O88935 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Syn1O88935 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Syn1O88935 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.9■■□□□ 1.9
Syn1O88935 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Syn1O88935 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.85■■□□□ 1.89
Syn1O88935 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms