Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tnfrsf17O88472 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tnfrsf17O88472 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Tnfrsf17O88472 Gm9397-201ENSMUST00000200125 605 ntBASIC25.4■■□□□ 1.66
Tnfrsf17O88472 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnfrsf17O88472 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Tnfrsf17O88472 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Tnfrsf17O88472 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.39■■□□□ 1.65
Tnfrsf17O88472 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Tnfrsf17O88472 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Tnfrsf17O88472 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tnfrsf17O88472 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Tnfrsf17O88472 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Tnfrsf17O88472 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Tnfrsf17O88472 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tnfrsf17O88472 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.31■■□□□ 1.64
Tnfrsf17O88472 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tnfrsf17O88472 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Tnfrsf17O88472 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tnfrsf17O88472 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.28■■□□□ 1.64
Tnfrsf17O88472 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tnfrsf17O88472 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Tnfrsf17O88472 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.26■■□□□ 1.63
Tnfrsf17O88472 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Tnfrsf17O88472 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.23■■□□□ 1.63
Tnfrsf17O88472 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tnfrsf17O88472 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.17■■□□□ 1.62
Tnfrsf17O88472 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.17■■□□□ 1.62
Tnfrsf17O88472 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tnfrsf17O88472 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tnfrsf17O88472 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.12■■□□□ 1.61
Tnfrsf17O88472 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tnfrsf17O88472 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tnfrsf17O88472 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.06■■□□□ 1.6
Tnfrsf17O88472 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.05■■□□□ 1.6
Tnfrsf17O88472 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.05■■□□□ 1.6
Tnfrsf17O88472 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tnfrsf17O88472 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tnfrsf17O88472 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25■■□□□ 1.59
Tnfrsf17O88472 Gm9939-201ENSMUST00000067161 1154 ntBASIC25■■□□□ 1.59
Tnfrsf17O88472 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Tnfrsf17O88472 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tnfrsf17O88472 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tnfrsf17O88472 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tnfrsf17O88472 Gm8503-201ENSMUST00000118131 455 ntBASIC24.96■■□□□ 1.59
Tnfrsf17O88472 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.96■■□□□ 1.59
Tnfrsf17O88472 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Tnfrsf17O88472 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tnfrsf17O88472 Gm24970-201ENSMUST00000175582 82 ntBASIC24.93■■□□□ 1.58
Tnfrsf17O88472 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Tnfrsf17O88472 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tnfrsf17O88472 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Tnfrsf17O88472 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.89■■□□□ 1.58
Tnfrsf17O88472 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.88■■□□□ 1.57
Tnfrsf17O88472 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tnfrsf17O88472 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Tnfrsf17O88472 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tnfrsf17O88472 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tnfrsf17O88472 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf17O88472 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf17O88472 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnfrsf17O88472 Mipep-204ENSMUST00000225043 1548 ntBASIC24.79■■□□□ 1.56
Tnfrsf17O88472 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tnfrsf17O88472 Gm6821-201ENSMUST00000107540 542 ntBASIC24.78■■□□□ 1.56
Tnfrsf17O88472 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Tnfrsf17O88472 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.68■■□□□ 1.54
Tnfrsf17O88472 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf17O88472 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.65■■□□□ 1.54
Tnfrsf17O88472 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Tnfrsf17O88472 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Tnfrsf17O88472 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Tnfrsf17O88472 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Tnfrsf17O88472 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Tnfrsf17O88472 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnfrsf17O88472 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.58■■□□□ 1.53
Tnfrsf17O88472 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnfrsf17O88472 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnfrsf17O88472 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnfrsf17O88472 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tnfrsf17O88472 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf17O88472 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.53■■□□□ 1.52
Tnfrsf17O88472 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.52■■□□□ 1.52
Tnfrsf17O88472 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf17O88472 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Tnfrsf17O88472 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tnfrsf17O88472 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tnfrsf17O88472 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf17O88472 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.42■■□□□ 1.5
Tnfrsf17O88472 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf17O88472 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms