Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tnfrsf17O88472 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tnfrsf17O88472 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Tnfrsf17O88472 Gm9397-201ENSMUST00000200125 605 ntBASIC25.4■■□□□ 1.66
Tnfrsf17O88472 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnfrsf17O88472 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Tnfrsf17O88472 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Tnfrsf17O88472 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.39■■□□□ 1.65
Tnfrsf17O88472 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Tnfrsf17O88472 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Tnfrsf17O88472 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tnfrsf17O88472 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Tnfrsf17O88472 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Tnfrsf17O88472 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Tnfrsf17O88472 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tnfrsf17O88472 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.31■■□□□ 1.64
Tnfrsf17O88472 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tnfrsf17O88472 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Tnfrsf17O88472 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tnfrsf17O88472 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.28■■□□□ 1.64
Tnfrsf17O88472 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tnfrsf17O88472 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tnfrsf17O88472 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Tnfrsf17O88472 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.26■■□□□ 1.63
Tnfrsf17O88472 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Tnfrsf17O88472 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.23■■□□□ 1.63
Tnfrsf17O88472 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tnfrsf17O88472 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.17■■□□□ 1.62
Tnfrsf17O88472 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.17■■□□□ 1.62
Tnfrsf17O88472 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tnfrsf17O88472 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tnfrsf17O88472 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.12■■□□□ 1.61
Tnfrsf17O88472 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tnfrsf17O88472 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tnfrsf17O88472 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.06■■□□□ 1.6
Tnfrsf17O88472 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.05■■□□□ 1.6
Tnfrsf17O88472 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.05■■□□□ 1.6
Tnfrsf17O88472 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tnfrsf17O88472 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tnfrsf17O88472 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25■■□□□ 1.59
Tnfrsf17O88472 Gm9939-201ENSMUST00000067161 1154 ntBASIC25■■□□□ 1.59
Tnfrsf17O88472 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Tnfrsf17O88472 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tnfrsf17O88472 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tnfrsf17O88472 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tnfrsf17O88472 Gm8503-201ENSMUST00000118131 455 ntBASIC24.96■■□□□ 1.59
Tnfrsf17O88472 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.96■■□□□ 1.59
Tnfrsf17O88472 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Tnfrsf17O88472 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tnfrsf17O88472 Gm24970-201ENSMUST00000175582 82 ntBASIC24.93■■□□□ 1.58
Tnfrsf17O88472 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Tnfrsf17O88472 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tnfrsf17O88472 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Tnfrsf17O88472 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.89■■□□□ 1.58
Tnfrsf17O88472 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.88■■□□□ 1.57
Tnfrsf17O88472 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tnfrsf17O88472 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Tnfrsf17O88472 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tnfrsf17O88472 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tnfrsf17O88472 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf17O88472 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf17O88472 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnfrsf17O88472 Mipep-204ENSMUST00000225043 1548 ntBASIC24.79■■□□□ 1.56
Tnfrsf17O88472 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tnfrsf17O88472 Gm6821-201ENSMUST00000107540 542 ntBASIC24.78■■□□□ 1.56
Tnfrsf17O88472 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Tnfrsf17O88472 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.68■■□□□ 1.54
Tnfrsf17O88472 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf17O88472 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.65■■□□□ 1.54
Tnfrsf17O88472 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Tnfrsf17O88472 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Tnfrsf17O88472 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Tnfrsf17O88472 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Tnfrsf17O88472 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Tnfrsf17O88472 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnfrsf17O88472 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.58■■□□□ 1.53
Tnfrsf17O88472 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnfrsf17O88472 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnfrsf17O88472 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnfrsf17O88472 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tnfrsf17O88472 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf17O88472 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.53■■□□□ 1.52
Tnfrsf17O88472 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.52■■□□□ 1.52
Tnfrsf17O88472 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf17O88472 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tnfrsf17O88472 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Tnfrsf17O88472 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tnfrsf17O88472 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tnfrsf17O88472 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf17O88472 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.42■■□□□ 1.5
Tnfrsf17O88472 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf17O88472 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms