Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Rgr-203ENSMUST00000225070 4704 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Mir291b-201ENSMUST00000104838 79 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm14676-201ENSMUST00000117722 858 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm12420-201ENSMUST00000119869 1048 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm12362-201ENSMUST00000121986 342 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm27149-201ENSMUST00000184716 1266 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm3052-201ENSMUST00000186409 829 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm9771-201ENSMUST00000198267 1137 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm42821-201ENSMUST00000199771 489 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 AC123698.1-201ENSMUST00000227090 402 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Mir194-2-201ENSMUST00000083648 86 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gm37264-201ENSMUST00000194916 2192 ntBASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ddx54Q8K4L0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm8661-201ENSMUST00000118688 992 ntBASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm12240-201ENSMUST00000120178 229 ntBASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm2566-201ENSMUST00000201267 431 ntBASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx54Q8K4L0 AC147366.2-201ENSMUST00000226859 2038 ntBASIC14.08□□□□□ -0.15
Ddx54Q8K4L0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx54Q8K4L0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Ddx54Q8K4L0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ddx54Q8K4L0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx54Q8K4L0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm15570-201ENSMUST00000122093 625 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm11686-201ENSMUST00000122397 333 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm26208-201ENSMUST00000158677 124 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm3355-201ENSMUST00000160079 487 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm28916-201ENSMUST00000186988 699 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm28381-201ENSMUST00000188403 193 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm18122-201ENSMUST00000211390 904 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms