Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm15573-201ENSMUST00000119487 540 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm14585-201ENSMUST00000120713 634 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm21778-201ENSMUST00000178779 471 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm29067-201ENSMUST00000190821 470 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm31941-201ENSMUST00000209689 350 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm2517-201ENSMUST00000215651 348 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.73□□□□□ -0.53
Ctdp1Q7TSG2 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm28032-201ENSMUST00000184104 96 ntBASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ctdp1Q7TSG2 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ctdp1Q7TSG2 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms