Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11700-201ENSMUST00000119409 403 ntBASIC9.79□□□□□ -0.84
VcanQ62059 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Gm16475-202ENSMUST00000209033 528 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Stx12-201ENSMUST00000030698 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Gm36638-202ENSMUST00000192073 2169 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Gm24470-201ENSMUST00000104486 132 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gm5801-201ENSMUST00000182247 780 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Gm5043-201ENSMUST00000202103 820 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gm4925-201ENSMUST00000092231 397 ntBASIC9.79□□□□□ -0.84
VcanQ62059 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
VcanQ62059 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
VcanQ62059 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Sh3bgrl2-204ENSMUST00000188241 3155 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Ces2a-204ENSMUST00000164182 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Gm25763-201ENSMUST00000104099 129 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm15576-201ENSMUST00000117806 583 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm11489-201ENSMUST00000118342 499 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm8391-201ENSMUST00000185632 726 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC9.78□□□□□ -0.84
VcanQ62059 AC155929.2-201ENSMUST00000218541 307 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
VcanQ62059 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
VcanQ62059 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VcanQ62059 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VcanQ62059 Gm14592-201ENSMUST00000117201 560 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm14686-201ENSMUST00000119926 343 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm29471-201ENSMUST00000190527 700 ntBASIC9.78□□□□□ -0.84
VcanQ62059 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.78□□□□□ -0.84
VcanQ62059 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Abcc12-205ENSMUST00000152438 3083 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Gm15516-201ENSMUST00000117292 193 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC9.78□□□□□ -0.84
VcanQ62059 Gm5960-201ENSMUST00000188483 406 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.78□□□□□ -0.84
VcanQ62059 Gm26930-201ENSMUST00000194874 1244 ntBASIC9.78□□□□□ -0.84
VcanQ62059 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 AC123692.1-201ENSMUST00000227514 730 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Gm6028-201ENSMUST00000077111 574 ntBASIC9.78□□□□□ -0.84
VcanQ62059 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
VcanQ62059 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
VcanQ62059 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VcanQ62059 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VcanQ62059 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VcanQ62059 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VcanQ62059 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VcanQ62059 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.77□□□□□ -0.84
VcanQ62059 n-R5s90-201ENSMUST00000103968 118 ntBASIC9.77□□□□□ -0.84
VcanQ62059 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
VcanQ62059 Gm23368-201ENSMUST00000116939 96 ntBASIC9.77□□□□□ -0.84
VcanQ62059 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VcanQ62059 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VcanQ62059 AC126939.2-201ENSMUST00000225989 307 ntBASIC9.77□□□□□ -0.84
VcanQ62059 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms