Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Syne3Q4FZC9 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm12899-201ENSMUST00000120565 551 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm25226-201ENSMUST00000158198 123 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm15744-201ENSMUST00000161734 213 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Mir6998-201ENSMUST00000183343 64 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm28032-201ENSMUST00000184104 96 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Syne3Q4FZC9 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Syne3Q4FZC9 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm13937-201ENSMUST00000121000 988 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm16165-201ENSMUST00000160140 795 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Mir6407-201ENSMUST00000184510 101 ntBASIC11.45□□□□□ -0.58
Syne3Q4FZC9 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Syne3Q4FZC9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms