Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.25□□□□□ -0.45
Gm28047Q3US59 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.25□□□□□ -0.45
Gm28047Q3US59 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.25□□□□□ -0.45
Gm28047Q3US59 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.25□□□□□ -0.45
Gm28047Q3US59 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm28047Q3US59 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm19087-201ENSMUST00000191430 946 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm42660-201ENSMUST00000197733 947 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm42657-201ENSMUST00000201746 211 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm45550-201ENSMUST00000209380 946 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.24□□□□□ -0.45
Gm28047Q3US59 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28047Q3US59 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm20392-201ENSMUST00000173047 701 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm42780-201ENSMUST00000197083 734 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm10179-201ENSMUST00000086233 688 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gm28047Q3US59 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.23□□□□□ -0.45
Gm28047Q3US59 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28047Q3US59 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 294.9 ms