Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim43aQ3TL54 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.41□□□□□ -0.58
Trim43aQ3TL54 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Gm10051-201ENSMUST00000145209 414 ntBASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Gm30946-201ENSMUST00000198288 724 ntBASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Gm44155-201ENSMUST00000203923 412 ntBASIC11.41□□□□□ -0.58
Trim43aQ3TL54 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim43aQ3TL54 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm9133-201ENSMUST00000118289 540 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm15352-201ENSMUST00000118696 270 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm23045-201ENSMUST00000175041 96 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm40414-201ENSMUST00000197608 481 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm44551-201ENSMUST00000208804 171 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms