Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
IghmP01872 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.06□□□□□ -0.8
IghmP01872 Gm12274-201ENSMUST00000120062 385 ntBASIC10.06□□□□□ -0.8
IghmP01872 Gm11824-201ENSMUST00000120191 846 ntBASIC10.06□□□□□ -0.8
IghmP01872 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Mir8091-201ENSMUST00000183602 139 ntBASIC10.06□□□□□ -0.8
IghmP01872 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm37466-201ENSMUST00000195692 652 ntBASIC10.06□□□□□ -0.8
IghmP01872 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
IghmP01872 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
IghmP01872 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.06□□□□□ -0.8
IghmP01872 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.06□□□□□ -0.8
IghmP01872 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm7589-201ENSMUST00000085631 534 ntBASIC10.06□□□□□ -0.8
IghmP01872 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.06□□□□□ -0.8
IghmP01872 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.06□□□□□ -0.8
IghmP01872 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
IghmP01872 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.06□□□□□ -0.8
IghmP01872 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
IghmP01872 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.06□□□□□ -0.8
IghmP01872 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
IghmP01872 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.05□□□□□ -0.8
IghmP01872 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.05□□□□□ -0.8
IghmP01872 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.05□□□□□ -0.8
IghmP01872 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.05□□□□□ -0.8
IghmP01872 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Mir6979-201ENSMUST00000183927 56 ntBASIC10.05□□□□□ -0.8
IghmP01872 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.05□□□□□ -0.8
IghmP01872 Gm37020-201ENSMUST00000195303 992 ntBASIC10.05□□□□□ -0.8
IghmP01872 Gm42816-201ENSMUST00000198433 325 ntBASIC10.05□□□□□ -0.8
IghmP01872 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
IghmP01872 Gm2875-201ENSMUST00000211333 360 ntBASIC10.05□□□□□ -0.8
IghmP01872 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.05□□□□□ -0.8
IghmP01872 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
IghmP01872 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.05□□□□□ -0.8
IghmP01872 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.05□□□□□ -0.8
IghmP01872 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
IghmP01872 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
IghmP01872 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
IghmP01872 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
IghmP01872 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
IghmP01872 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.04□□□□□ -0.8
IghmP01872 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms