Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm13002-201ENSMUST00000119286 682 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm5259-201ENSMUST00000191231 800 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm18299-201ENSMUST00000192026 636 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm2566-201ENSMUST00000201267 431 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col4a6B1AVK5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm15264-201ENSMUST00000118050 502 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm11824-201ENSMUST00000120191 846 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm14108-201ENSMUST00000122234 494 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 H2afy3-201ENSMUST00000151919 1112 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm16574-201ENSMUST00000159301 745 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm16581-201ENSMUST00000160730 991 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm26913-201ENSMUST00000182391 732 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Tspy-ps-203ENSMUST00000186546 989 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm9523-201ENSMUST00000199146 1159 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm28653-202ENSMUST00000227082 521 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col4a6B1AVK5 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms