Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm23439-201ENSMUST00000104292 132 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm6238-201ENSMUST00000120999 465 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm14006-201ENSMUST00000122132 981 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm15258-201ENSMUST00000153801 741 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm23582-201ENSMUST00000158530 139 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm4462-201ENSMUST00000166453 492 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm5976-201ENSMUST00000180794 996 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm8162-201ENSMUST00000213951 665 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.62□□□□□ -0.71
Rrp8Q9DB85 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rrp8Q9DB85 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm6755-201ENSMUST00000100598 864 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm6740-201ENSMUST00000100617 864 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm16228-201ENSMUST00000162286 809 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm6686-201ENSMUST00000178455 258 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm28032-201ENSMUST00000184104 96 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm38038-201ENSMUST00000193803 259 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm7242-201ENSMUST00000221134 705 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rrp8Q9DB85 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms