Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx6-1Q99MA9 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm14176-201ENSMUST00000121302 477 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm6939-201ENSMUST00000122029 864 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm14363-201ENSMUST00000122304 409 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm25591-201ENSMUST00000177317 94 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm26943-201ENSMUST00000182295 957 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm43037-201ENSMUST00000196808 250 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm18555-201ENSMUST00000197935 584 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm43106-201ENSMUST00000199485 637 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm7242-201ENSMUST00000221134 705 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm17872-201ENSMUST00000222550 532 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm10238-201ENSMUST00000089689 408 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm6304-201ENSMUST00000096579 447 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx6-1Q99MA9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Rgr-203ENSMUST00000225070 4704 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Mir1893-201ENSMUST00000122565 83 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm13857-201ENSMUST00000139645 173 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm7833-201ENSMUST00000183288 990 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm42687-201ENSMUST00000199075 164 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms