Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lysmd4Q8CC84 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm5244-201ENSMUST00000164001 339 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm2383-201ENSMUST00000181461 807 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm28450-201ENSMUST00000187349 638 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm5369-201ENSMUST00000217499 588 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lysmd4Q8CC84 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.63□□□□□ -0.87
Lysmd4Q8CC84 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms