Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm32914-201ENSMUST00000203815 2228 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.81□□□□□ -0.84
VcanQ62059 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.81□□□□□ -0.84
VcanQ62059 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Cst6-201ENSMUST00000025764 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
VcanQ62059 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC9.81□□□□□ -0.84
VcanQ62059 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
VcanQ62059 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VcanQ62059 AC164883.7-201ENSMUST00000228534 851 ntBASIC9.81□□□□□ -0.84
VcanQ62059 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VcanQ62059 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.81□□□□□ -0.84
VcanQ62059 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Gm9516-201ENSMUST00000119684 424 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Gm12376-201ENSMUST00000120538 607 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm16077-201ENSMUST00000121915 655 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC9.81□□□□□ -0.84
VcanQ62059 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC9.81□□□□□ -0.84
VcanQ62059 Mir181c-201ENSMUST00000083549 89 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
VcanQ62059 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
VcanQ62059 Gm15645-202ENSMUST00000183393 1299 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Gm10250-201ENSMUST00000090488 482 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Gm10339-202ENSMUST00000181509 1691 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Gm13472-201ENSMUST00000120948 314 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC9.8□□□□□ -0.84
VcanQ62059 Gm29725-201ENSMUST00000206614 407 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Gm10080-201ENSMUST00000075585 438 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Gm10344-201ENSMUST00000193498 1419 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Gm4798-201ENSMUST00000218024 1699 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
VcanQ62059 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
VcanQ62059 Gm23027-201ENSMUST00000158771 158 ntBASIC9.8□□□□□ -0.84
VcanQ62059 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Rit1-207ENSMUST00000172252 820 ntTSL 3 BASIC9.8□□□□□ -0.84
VcanQ62059 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.8□□□□□ -0.84
VcanQ62059 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VcanQ62059 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VcanQ62059 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
VcanQ62059 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms