Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.96□□□□□ -0.49
Hmgb1P63158 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.96□□□□□ -0.49
Hmgb1P63158 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.96□□□□□ -0.49
Hmgb1P63158 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Hmgb1P63158 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hmgb1P63158 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm15881-201ENSMUST00000148792 942 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm16165-201ENSMUST00000160140 795 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Mir6546-201ENSMUST00000184460 62 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm8197-202ENSMUST00000193422 934 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm9645-201ENSMUST00000197131 792 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm10263-201ENSMUST00000085163 300 ntBASIC11.95□□□□□ -0.5
Hmgb1P63158 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hmgb1P63158 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hmgb1P63158 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.94□□□□□ -0.5
Hmgb1P63158 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Gm19091-201ENSMUST00000208120 978 ntBASIC11.94□□□□□ -0.5
Hmgb1P63158 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.94□□□□□ -0.5
Hmgb1P63158 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.94□□□□□ -0.5
Hmgb1P63158 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms