Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC8.92□□□□□ -0.98
Timp3P39876 Gm25951-201ENSMUST00000175330 64 ntBASIC8.92□□□□□ -0.98
Timp3P39876 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Gm7593-201ENSMUST00000187246 644 ntBASIC8.92□□□□□ -0.98
Timp3P39876 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC8.92□□□□□ -0.98
Timp3P39876 Gm42660-201ENSMUST00000197733 947 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Gm18463-201ENSMUST00000207258 474 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Gm18460-201ENSMUST00000208088 464 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Gm2594-201ENSMUST00000214774 742 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Gm7959-201ENSMUST00000221823 1078 ntBASIC8.92□□□□□ -0.98
Timp3P39876 AC158392.3-201ENSMUST00000224271 1284 ntBASIC8.92□□□□□ -0.98
Timp3P39876 AC154361.2-201ENSMUST00000224747 943 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Lect2-202ENSMUST00000225183 823 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Timp3P39876 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Timp3P39876 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Timp3P39876 Gm10463-202ENSMUST00000195772 2889 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Timp3P39876 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC8.92□□□□□ -0.98
Timp3P39876 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC8.92□□□□□ -0.98
Timp3P39876 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Timp3P39876 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Timp3P39876 Gm43143-201ENSMUST00000196083 2023 ntBASIC8.92□□□□□ -0.98
Timp3P39876 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm4454-201ENSMUST00000190585 2578 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC8.91□□□□□ -0.98
Timp3P39876 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm5308-201ENSMUST00000196752 1354 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Spata33-207ENSMUST00000212760 4074 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Timp3P39876 Gm6158-201ENSMUST00000109467 904 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm11801-201ENSMUST00000117807 746 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Gm12816-201ENSMUST00000118069 1212 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Gm12990-201ENSMUST00000120372 468 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Gm11980-201ENSMUST00000121445 986 ntBASIC8.91□□□□□ -0.98
Timp3P39876 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm25830-201ENSMUST00000158923 132 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Timp3P39876 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Timp3P39876 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Gm43692-201ENSMUST00000198236 1062 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC8.91□□□□□ -0.98
Timp3P39876 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Gm8255-201ENSMUST00000218693 305 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Gm9111-201ENSMUST00000219394 709 ntBASIC8.91□□□□□ -0.98
Timp3P39876 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Gm4604-201ENSMUST00000025040 390 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Timp3P39876 Mir483-201ENSMUST00000093631 73 ntBASIC8.91□□□□□ -0.98
Timp3P39876 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Timp3P39876 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Timp3P39876 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Timp3P39876 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms