Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm17391-201ENSMUST00000171036 126 ntBASIC10.08□□□□□ -0.8
IghmP01872 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.08□□□□□ -0.8
IghmP01872 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.08□□□□□ -0.8
IghmP01872 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.08□□□□□ -0.8
IghmP01872 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.08□□□□□ -0.8
IghmP01872 Gm42780-201ENSMUST00000197083 734 ntBASIC10.08□□□□□ -0.8
IghmP01872 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.08□□□□□ -0.8
IghmP01872 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Snora73b-201ENSMUST00000083419 205 ntBASIC10.08□□□□□ -0.8
IghmP01872 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.08□□□□□ -0.8
IghmP01872 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.08□□□□□ -0.8
IghmP01872 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
IghmP01872 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.08□□□□□ -0.8
IghmP01872 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.08□□□□□ -0.8
IghmP01872 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.08□□□□□ -0.8
IghmP01872 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
IghmP01872 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.08□□□□□ -0.8
IghmP01872 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
IghmP01872 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
IghmP01872 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.07□□□□□ -0.8
IghmP01872 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.07□□□□□ -0.8
IghmP01872 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.07□□□□□ -0.8
IghmP01872 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
IghmP01872 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.07□□□□□ -0.8
IghmP01872 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.07□□□□□ -0.8
IghmP01872 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.07□□□□□ -0.8
IghmP01872 Gm42710-201ENSMUST00000200608 985 ntBASIC10.07□□□□□ -0.8
IghmP01872 Gm43811-201ENSMUST00000202862 695 ntBASIC10.07□□□□□ -0.8
IghmP01872 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gm9463-201ENSMUST00000206707 601 ntBASIC10.07□□□□□ -0.8
IghmP01872 Gm44814-201ENSMUST00000207018 434 ntBASIC10.07□□□□□ -0.8
IghmP01872 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.07□□□□□ -0.8
IghmP01872 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.07□□□□□ -0.8
IghmP01872 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.07□□□□□ -0.8
IghmP01872 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
IghmP01872 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
IghmP01872 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
IghmP01872 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
IghmP01872 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.07□□□□□ -0.8
IghmP01872 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
IghmP01872 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
IghmP01872 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.06□□□□□ -0.8
IghmP01872 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
IghmP01872 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms