Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm27441-201ENSMUST00000185000 105 ntBASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm19058-201ENSMUST00000192135 598 ntBASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Gm36948-201ENSMUST00000194708 3247 ntBASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Gm12097-201ENSMUST00000121523 1414 ntBASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Gm6727-201ENSMUST00000204102 1518 ntBASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc180J3QNE4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Gm13758-201ENSMUST00000118699 743 ntBASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc180J3QNE4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm15626-201ENSMUST00000117478 868 ntBASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Kif4-ps-202ENSMUST00000185083 652 ntBASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm10344-201ENSMUST00000193498 1419 ntBASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm23081-201ENSMUST00000157845 297 ntBASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Gm26205-201ENSMUST00000082907 134 ntBASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc180J3QNE4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm12254-201ENSMUST00000134617 471 ntBASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm26532-201ENSMUST00000180630 690 ntBASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm8707-201ENSMUST00000183325 980 ntBASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm18391-201ENSMUST00000217189 658 ntBASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms