Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Ubl3Q9Z2M6 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm42657-201ENSMUST00000201746 211 ntBASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm8285-201ENSMUST00000208293 759 ntBASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ubl3Q9Z2M6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ubl3Q9Z2M6 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Snord55-201ENSMUST00000174939 79 ntBASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm8365-201ENSMUST00000197334 648 ntBASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ubl3Q9Z2M6 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms