Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.78□□□□□ -0.36
Col20a1Q923P0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col20a1Q923P0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.77□□□□□ -0.36
Col20a1Q923P0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Col20a1Q923P0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Col20a1Q923P0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Mir671-201ENSMUST00000102432 98 ntBASIC12.77□□□□□ -0.37
Col20a1Q923P0 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Mir1249-201ENSMUST00000116791 98 ntBASIC12.77□□□□□ -0.37
Col20a1Q923P0 Gm11573-201ENSMUST00000119956 394 ntBASIC12.77□□□□□ -0.37
Col20a1Q923P0 Gm6441-201ENSMUST00000120983 696 ntBASIC12.77□□□□□ -0.37
Col20a1Q923P0 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Gm7539-201ENSMUST00000189789 630 ntBASIC12.77□□□□□ -0.37
Col20a1Q923P0 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.77□□□□□ -0.37
Col20a1Q923P0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col20a1Q923P0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm12948-201ENSMUST00000119406 682 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm13827-201ENSMUST00000148801 372 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm5801-201ENSMUST00000182247 780 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm29543-201ENSMUST00000188138 967 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm37207-201ENSMUST00000194284 296 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm37301-201ENSMUST00000195412 568 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gm19640-201ENSMUST00000214849 464 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.76□□□□□ -0.37
Col20a1Q923P0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col20a1Q923P0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.75□□□□□ -0.37
Col20a1Q923P0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col20a1Q923P0 BC043934-202ENSMUST00000185694 2356 ntBASIC12.75□□□□□ -0.37
Col20a1Q923P0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col20a1Q923P0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms