Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc38Q8CDN8 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm13611-201ENSMUST00000118269 318 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm16165-201ENSMUST00000160140 795 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm6677-201ENSMUST00000195100 441 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm37466-201ENSMUST00000195692 652 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm43520-201ENSMUST00000197996 164 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm25580-201ENSMUST00000083409 327 ntBASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc38Q8CDN8 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm26461-201ENSMUST00000175064 290 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc38Q8CDN8 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms