Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lysmd4Q8CC84 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm29543-201ENSMUST00000188138 967 ntBASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm43852-201ENSMUST00000202098 917 ntBASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Lysmd4Q8CC84 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm11450-201ENSMUST00000121144 333 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Snord55-201ENSMUST00000174939 79 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm37020-201ENSMUST00000195303 992 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm44323-201ENSMUST00000198689 129 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 AU022133-201ENSMUST00000200601 873 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm7319-201ENSMUST00000210047 778 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lysmd4Q8CC84 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms