Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm11578-201ENSMUST00000118530 459 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm11993-201ENSMUST00000121861 820 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm7719-201ENSMUST00000182374 975 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Mir6941-201ENSMUST00000184711 59 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm18377-201ENSMUST00000215141 607 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm25125-201ENSMUST00000083340 136 ntBASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdh19Q80TF3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm18733-202ENSMUST00000174447 401 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm18201-201ENSMUST00000174735 875 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm23400-201ENSMUST00000174994 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm26463-201ENSMUST00000175065 101 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm24332-201ENSMUST00000175102 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25959-201ENSMUST00000175112 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm22475-201ENSMUST00000175169 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm22903-201ENSMUST00000175193 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25070-201ENSMUST00000175237 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm24159-201ENSMUST00000175264 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25299-201ENSMUST00000175283 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm23798-201ENSMUST00000175560 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm23802-201ENSMUST00000175565 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25708-201ENSMUST00000177687 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm24370-201ENSMUST00000178007 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm23049-201ENSMUST00000178068 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm28019-201ENSMUST00000178138 101 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25571-201ENSMUST00000178322 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25355-201ENSMUST00000178456 101 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm24975-201ENSMUST00000178492 101 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm23189-201ENSMUST00000178954 102 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm25100-201ENSMUST00000179750 101 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm23064-201ENSMUST00000179866 101 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm7593-201ENSMUST00000187246 644 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm42751-201ENSMUST00000198065 559 ntBASIC10.69□□□□□ -0.7
Pcdh19Q80TF3 Gm6439-201ENSMUST00000199849 862 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms