Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
VcanQ62059 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
VcanQ62059 Mir6239-201ENSMUST00000183564 105 ntBASIC9.83□□□□□ -0.84
VcanQ62059 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Platr10-202ENSMUST00000191479 818 ntBASIC9.83□□□□□ -0.84
VcanQ62059 Gm43110-201ENSMUST00000198877 226 ntBASIC9.83□□□□□ -0.84
VcanQ62059 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
VcanQ62059 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Gm8577-201ENSMUST00000122420 986 ntBASIC9.83□□□□□ -0.84
VcanQ62059 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.83□□□□□ -0.84
VcanQ62059 Gm37886-201ENSMUST00000195349 1513 ntBASIC9.83□□□□□ -0.84
VcanQ62059 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC9.83□□□□□ -0.84
VcanQ62059 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VcanQ62059 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 1700013G24Rik-201ENSMUST00000048893 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VcanQ62059 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VcanQ62059 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.82□□□□□ -0.84
VcanQ62059 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.82□□□□□ -0.84
VcanQ62059 n-R5s51-201ENSMUST00000104473 123 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm11401-201ENSMUST00000117212 344 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm8482-201ENSMUST00000117972 471 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm13841-201ENSMUST00000118829 483 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm11449-201ENSMUST00000119175 476 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm22876-201ENSMUST00000175450 298 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm8210-201ENSMUST00000178557 483 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm15454-201ENSMUST00000179718 483 ntBASIC9.82□□□□□ -0.84
VcanQ62059 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.82□□□□□ -0.84
VcanQ62059 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.82□□□□□ -0.84
VcanQ62059 AC161877.1-201ENSMUST00000227736 699 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm6344-201ENSMUST00000075962 483 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
VcanQ62059 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Gm44547-201ENSMUST00000207793 1446 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
VcanQ62059 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VcanQ62059 Gm18182-201ENSMUST00000191380 1251 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC9.82□□□□□ -0.84
VcanQ62059 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Gm31763-202ENSMUST00000218205 1724 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.82□□□□□ -0.84
VcanQ62059 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VcanQ62059 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.81□□□□□ -0.84
VcanQ62059 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC9.81□□□□□ -0.84
VcanQ62059 Gm44139-201ENSMUST00000204903 373 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms