Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
PrkcbP68404 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkcbP68404 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
PrkcbP68404 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.69□□□□□ -0.54
PrkcbP68404 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm12947-201ENSMUST00000116114 420 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Gm13981-201ENSMUST00000122360 447 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm7985-201ENSMUST00000183329 981 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Gm44640-201ENSMUST00000206894 247 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
PrkcbP68404 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.69□□□□□ -0.54
PrkcbP68404 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
PrkcbP68404 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.69□□□□□ -0.54
PrkcbP68404 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
PrkcbP68404 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.69□□□□□ -0.54
PrkcbP68404 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkcbP68404 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
PrkcbP68404 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
PrkcbP68404 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.68□□□□□ -0.54
PrkcbP68404 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.68□□□□□ -0.54
PrkcbP68404 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm11919-201ENSMUST00000117609 721 ntBASIC11.68□□□□□ -0.54
PrkcbP68404 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.68□□□□□ -0.54
PrkcbP68404 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm24346-201ENSMUST00000158712 194 ntBASIC11.68□□□□□ -0.54
PrkcbP68404 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.68□□□□□ -0.54
PrkcbP68404 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.68□□□□□ -0.54
PrkcbP68404 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.68□□□□□ -0.54
PrkcbP68404 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
PrkcbP68404 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
PrkcbP68404 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkcbP68404 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
PrkcbP68404 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
PrkcbP68404 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms