Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm43947-201ENSMUST00000203019 959 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rrp1P56183 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm37567-201ENSMUST00000193241 2279 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rrp1P56183 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.17□□□□□ -0.46
Rrp1P56183 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rrp1P56183 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.16□□□□□ -0.46
Rrp1P56183 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rrp1P56183 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Rrp1P56183 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.16□□□□□ -0.46
Rrp1P56183 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm14263-201ENSMUST00000117955 746 ntBASIC12.16□□□□□ -0.46
Rrp1P56183 Gm13408-201ENSMUST00000119822 798 ntBASIC12.16□□□□□ -0.46
Rrp1P56183 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm13935-201ENSMUST00000121859 798 ntBASIC12.16□□□□□ -0.46
Rrp1P56183 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm5244-201ENSMUST00000164001 339 ntBASIC12.16□□□□□ -0.46
Rrp1P56183 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.16□□□□□ -0.46
Rrp1P56183 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.16□□□□□ -0.46
Rrp1P56183 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Rrp1P56183 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rrp1P56183 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rrp1P56183 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.15□□□□□ -0.46
Rrp1P56183 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Cdh18-207ENSMUST00000226693 2165 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rrp1P56183 Gm11949-201ENSMUST00000117640 372 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Mir1943-201ENSMUST00000158276 73 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Rrp1P56183 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.15□□□□□ -0.46
Rrp1P56183 Gm45118-201ENSMUST00000208928 825 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.15□□□□□ -0.46
Rrp1P56183 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rrp1P56183 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC12.15□□□□□ -0.46
Rrp1P56183 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms