Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox1P53783 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox1P53783 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox1P53783 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox1P53783 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox1P53783 Gm28391-201ENSMUST00000185202 379 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Gm29528-201ENSMUST00000186699 379 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Gm29526-201ENSMUST00000187217 379 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Sox1P53783 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 CT025547.1-201ENSMUST00000225127 578 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 Gm12904-201ENSMUST00000117451 1399 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.13□□□□□ -0.63
Sox1P53783 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox1P53783 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox1P53783 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm9864-201ENSMUST00000090043 1656 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm9516-201ENSMUST00000119684 424 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Gm23563-201ENSMUST00000174900 251 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox1P53783 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox1P53783 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sox1P53783 Gm7997-201ENSMUST00000210546 980 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC11.12□□□□□ -0.63
Sox1P53783 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm24146-201ENSMUST00000082760 321 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC11.12□□□□□ -0.63
Sox1P53783 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox1P53783 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.12□□□□□ -0.63
Sox1P53783 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox1P53783 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox1P53783 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox1P53783 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sox1P53783 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox1P53783 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms