Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx2P43241 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cdx2P43241 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Cdx2P43241 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Gm6939-201ENSMUST00000122029 864 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm17782-201ENSMUST00000174345 880 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Gm27826-201ENSMUST00000175282 255 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm7833-201ENSMUST00000183288 990 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Gm37597-201ENSMUST00000191853 382 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm43117-201ENSMUST00000198531 379 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx2P43241 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Gm8796-201ENSMUST00000219122 936 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.31□□□□□ -0.76
Cdx2P43241 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cdx2P43241 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx2P43241 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.31□□□□□ -0.76
Cdx2P43241 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx2P43241 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Cdx2P43241 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cdx2P43241 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.3□□□□□ -0.76
Cdx2P43241 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm25591-201ENSMUST00000177317 94 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Gm7255-201ENSMUST00000187371 908 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdx2P43241 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm5302-201ENSMUST00000202130 796 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Gm18164-201ENSMUST00000213769 927 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Gm18166-201ENSMUST00000215557 927 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Gm5040-201ENSMUST00000218609 800 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm29689-201ENSMUST00000221076 589 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdx2P43241 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.3□□□□□ -0.76
Cdx2P43241 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.3□□□□□ -0.76
Cdx2P43241 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cdx2P43241 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Cdx2P43241 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cdx2P43241 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cdx2P43241 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx2P43241 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cdx2P43241 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cdx2P43241 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cdx2P43241 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.29□□□□□ -0.76
Cdx2P43241 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cdx2P43241 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms