Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.68□□□□□ -0.7
Cd9P40240 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.68□□□□□ -0.7
Cd9P40240 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cd9P40240 Gm7719-201ENSMUST00000182374 975 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Gm18776-201ENSMUST00000188833 654 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd9P40240 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd9P40240 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cd9P40240 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cd9P40240 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cd9P40240 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd9P40240 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.68□□□□□ -0.7
Cd9P40240 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd9P40240 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd9P40240 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Cd9P40240 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm25053-201ENSMUST00000103982 133 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm25922-201ENSMUST00000104281 130 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm14497-201ENSMUST00000119537 580 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.67□□□□□ -0.7
Cd9P40240 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm22442-201ENSMUST00000157256 144 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm24679-201ENSMUST00000158762 111 ntBASIC10.67□□□□□ -0.7
Cd9P40240 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm27953-201ENSMUST00000185171 143 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm42660-201ENSMUST00000197733 947 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm25053-202ENSMUST00000199731 132 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm5881-201ENSMUST00000204737 367 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Gm44126-201ENSMUST00000204831 514 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cd9P40240 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Cd9P40240 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cd9P40240 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.67□□□□□ -0.7
Cd9P40240 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Cd9P40240 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd9P40240 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cd9P40240 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.66□□□□□ -0.7
Cd9P40240 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.66□□□□□ -0.7
Cd9P40240 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cd9P40240 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cd9P40240 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cd9P40240 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cd9P40240 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Cd9P40240 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cd9P40240 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.66□□□□□ -0.7
Cd9P40240 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms