Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Pcdh1F7BJK1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm12217-201ENSMUST00000118858 696 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm37981-201ENSMUST00000194280 535 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm5369-201ENSMUST00000217499 588 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm10020-201ENSMUST00000081993 612 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Pcdh1F7BJK1 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm23200-201ENSMUST00000104379 132 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm25661-201ENSMUST00000157704 296 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm43852-201ENSMUST00000202098 917 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm35638-201ENSMUST00000220724 652 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 AC114573.1-201ENSMUST00000224120 1210 ntBASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Pcdh1F7BJK1 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms